RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 STPG4Q8N801 248 aa13.77□□□□□ -0.21
SEMA3B-214ENST00000619119 OR14L1PQ8NHC6 308 aa13.77□□□□□ -0.21
SEMA3B-214ENST00000619119 KTI12Q96EK9 354 aaPredicted RBP13.77□□□□□ -0.21
SEMA3B-214ENST00000619119 SCGB3A2Q96PL1 93 aa13.77□□□□□ -0.21
SEMA3B-214ENST00000619119 ANGPTL4Q9BY76 406 aa13.77□□□□□ -0.21
SEMA3B-214ENST00000619119 SH3BGRL2Q9UJC5 107 aa13.77□□□□□ -0.21
SEMA3B-214ENST00000619119 LOC102724200A0A096LPH7 203 aaPredicted RBP13.77□□□□□ -0.21
SEMA3B-214ENST00000619119 OMGP23515 440 aa13.77□□□□□ -0.21
SEMA3B-214ENST00000619119 NUP54Q7Z3B4 507 aa13.77□□□□□ -0.21
SEMA3B-214ENST00000619119 IL22RA1Q8N6P7 574 aa13.77□□□□□ -0.21
SEMA3B-214ENST00000619119 NKAIN3Q8N8D7 197 aa13.77□□□□□ -0.21
SEMA3B-214ENST00000619119 ZNF2Q9BSG1 426 aaPredicted RBP13.77□□□□□ -0.21
SEMA3B-214ENST00000619119 PCGF1Q9BSM1 259 aa13.77□□□□□ -0.21
SEMA3B-214ENST00000619119 EHFQ9NZC4 300 aa13.77□□□□□ -0.21
SEMA3B-214ENST00000619119 B3GALT5Q9Y2C3 310 aa13.77□□□□□ -0.21
SEMA3B-214ENST00000619119 FAM230AA0A1W2PPH8 454 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 ZFP92A6NM28 416 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 GLI4P10075 376 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 GZMHP20718 246 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 EMP2P54851 167 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 SLC17A1Q14916 467 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 ATG4DQ86TL0 474 aaPredicted RBP13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 TMEM105Q8N8V8 129 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 MRGPRDQ8TDS7 321 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 TECTBQ96PL2 329 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 CIB3Q96Q77 187 aaPredicted RBP13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 GPR35Q9HC97 309 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 TCFL5Q9UL49 500 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 C14orf166Q9Y224 244 aaKnown RBP13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 LOC105371242A0A075B767 164 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 A8MVM7 634 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 HSBP1L1C9JCN9 74 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 ETV2O00321 342 aaPredicted RBP13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 SMPD2O60906 423 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 OR2J2O76002 312 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 GRK6P43250 576 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 EGR4Q05215 589 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 ADIRFQ15847 76 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 ANKRD37Q7Z713 158 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 NAT6Q93015 286 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 P4HTMQ9NXG6 502 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 ZNF581Q9P0T4 197 aa13.76□□□□□ -0.21
SEMA3B-214ENST00000619119 FIGNL2A6NMB9 653 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 K7EP13 123 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 TSPAN2O60636 221 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 VSIG8P0DPA2 414 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 FBXW4P57775 412 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 ARFRP1Q13795 201 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 FAM90A2PQ658T7 463 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 OR8G2PQ6IF36 304 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 C16orf82Q7Z2V1 217 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 ZNF440Q8IYI8 595 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 TMEM256Q8N2U0 113 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 CLDND2Q8NHS1 167 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 TMEM170AQ8WVE7 144 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 NSG1A0A0A6YYJ2 146 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 TNFSF13O75888 250 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 CCL4P13236 92 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 IGFBP3P17936 291 aaPredicted RBP13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 PDLIM4P50479 330 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 SP6Q3SY56 376 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 GCNT2Q8N0V5 402 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 OR10S1Q8NGN2 331 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 AURKAIP1Q9NWT8 199 aaPredicted RBP13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 SLC7A11Q9UPY5 501 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 A0A1W2PN81 502 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 CHRNA7P36544 502 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 ZNF41P51814 821 aaPredicted RBP13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 HIST1H3AP68431 136 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 ZFP36L1Q07352 338 aaKnown RBP13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 CHRFAM7AQ494W8 412 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 VAX1Q5SQQ9 334 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 ZCCHC14Q8WYQ9 949 aaKnown RBP13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 SPACA5Q96QH8 159 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 OR8B4Q96RC9 309 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 C20orf144Q9BQM9 153 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 TUBD1Q9UJT1 453 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 HIF3AQ9Y2N7 669 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 ADAMTS20P59510 1910 aa13.75□□□□□ -0.21
SEMA3B-214ENST00000619119 MED12Q93074 2177 aa13.74□□□□□ -0.21
SEMA3B-214ENST00000619119 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.74□□□□□ -0.21
SEMA3B-214ENST00000619119 MEGF11A6BM72 1044 aa13.74□□□□□ -0.21
SEMA3B-214ENST00000619119 TNFSF12O43508 249 aa13.74□□□□□ -0.21
SEMA3B-214ENST00000619119 CSNK2A1P68400 391 aaPredicted RBP13.74□□□□□ -0.21
SEMA3B-214ENST00000619119 CSNK2A3Q8NEV1 391 aa13.74□□□□□ -0.21
SEMA3B-214ENST00000619119 SLC24A4Q8NFF2 622 aa13.74□□□□□ -0.21
SEMA3B-214ENST00000619119 TMEM14AQ9Y6G1 99 aa13.74□□□□□ -0.21
SEMA3B-214ENST00000619119 SOCS1O15524 211 aa13.74□□□□□ -0.21
SEMA3B-214ENST00000619119 RUNX1Q01196 453 aa13.74□□□□□ -0.21
SEMA3B-214ENST00000619119 ZNF74Q16587 644 aa13.74□□□□□ -0.21
SEMA3B-214ENST00000619119 OR4C5Q8NGB2 326 aa13.74□□□□□ -0.21
SEMA3B-214ENST00000619119 PGAM5Q96HS1 289 aa13.74□□□□□ -0.21
SEMA3B-214ENST00000619119 VAMP8Q9BV40 100 aa13.74□□□□□ -0.21
SEMA3B-214ENST00000619119 CALHM2Q9HA72 323 aa13.74□□□□□ -0.21
SEMA3B-214ENST00000619119 TMEM242Q9NWH2 141 aa13.74□□□□□ -0.21
SEMA3B-214ENST00000619119 LOC107986453A0A1B0GWG9 222 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 MPIG6BO95866 241 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 PNMTP11086 282 aa13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 PNRC1Q12796 327 aaPredicted RBP13.73□□□□□ -0.21
SEMA3B-214ENST00000619119 C1orf100Q5SVJ3 147 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms