RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 SUMF1Q8NBK3 374 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 GPBAR1Q8TDU6 330 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 GSN-AS1Q9NRJ2 163 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 PLSCR4Q9NRQ2 329 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 OCIAD1Q9NX40 245 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 SLC45A2Q9UMX9 530 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 C7orf77A4D0Y5 90 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 CLDN34H7C241 214 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 SRFP11831 508 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 P2RY4P51582 365 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 EDDM3AQ14507 147 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 LILRA6Q6PI73 481 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 ANKRD29Q8N6D5 301 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 GDF15Q99988 308 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 RETNQ9HD89 108 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 ST6GALNAC2Q9UJ37 374 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 DSPPQ9NZW4 1301 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 C3orf85A0A1B0GTC6 90 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 CST2P09228 141 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 GLI4P10075 376 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 UBE2AP49459 152 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 KHDC3LQ587J8 217 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 TMEM215Q68D42 235 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 SLC36A1Q7Z2H8 476 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 C20orf196Q8IYI0 205 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 GVQW1Q8N7I0 195 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 NFAM1Q8NET5 270 aaPredicted RBP2.71□□□□□ -1.98
LPP-221ENST00000618621 SLC26A10Q8NG04 563 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 GTF3AQ92664 365 aaKnown RBP2.71□□□□□ -1.98
LPP-221ENST00000618621 EXTL1Q92935 676 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 CMBLQ96DG6 245 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 CITED1Q99966 193 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 WFDC6Q9BQY6 131 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 TMEM147Q9BVK8 224 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 SLC25A22Q9H936 323 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 LANCL2Q9NS86 450 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 VAX2Q9UIW0 290 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 LRP12Q9Y561 859 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 PHIPQ8WWQ0 1821 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 MED12LQ86YW9 2145 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 TET1Q8NFU7 2136 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 FAM24AA6NFZ4 105 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 CT45A10P0DMU9 189 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 PTHLHP12272 177 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 LPAR6P43657 344 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 TRA2AQ13595 282 aaKnown RBP eCLIP2.71□□□□□ -1.98
LPP-221ENST00000618621 CLEC9AQ6UXN8 241 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 SLC35E1Q96K37 410 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 CHRNA10Q9GZZ6 450 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 TMEM30CPA0ZSE6 113 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 MPZL1O95297 269 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 NPY1RP25929 384 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 FCER1GP30273 86 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 SRP14P37108 136 aaKnown RBP2.71□□□□□ -1.98
LPP-221ENST00000618621 AQP3Q92482 292 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 HEXA-AS1Q9H8Q6 139 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 MSRB2Q9Y3D2 182 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 CHTOPQ9Y3Y2 248 aaKnown RBP2.71□□□□□ -1.98
LPP-221ENST00000618621 TOPAZ1Q8N9V7 1692 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 ATXN7O15265 892 aaPredicted RBP2.71□□□□□ -1.98
LPP-221ENST00000618621 TOX3O15405 576 aaPredicted RBP2.71□□□□□ -1.98
LPP-221ENST00000618621 CTSVO60911 334 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 DXOO77932 396 aaKnown RBP2.71□□□□□ -1.98
LPP-221ENST00000618621 NCR3LG1Q68D85 454 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 DGAT2L6Q6ZPD8 337 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 SFRP2Q96HF1 295 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 ANGPTL4Q9BY76 406 aa2.71□□□□□ -1.98
LPP-221ENST00000618621 ANKHD1Q8IWZ3 2542 aaKnown RBP2.71□□□□□ -1.98
LPP-221ENST00000618621 PRKNO60260 465 aaPredicted RBP2.7□□□□□ -1.98
LPP-221ENST00000618621 PDCD6O75340 191 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 CCL11P51671 97 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 OR11G2Q8NGC1 345 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 RNF2Q99496 336 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 MTCH2Q9Y6C9 303 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 TRBV5-5A0A0J9YX44 114 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 DLK1P80370 383 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 ZNF718Q3SXZ3 478 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 OTPQ5XKR4 325 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 SLX4Q8IY92 1834 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 OR5A2Q8NGI9 324 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 C2CD4CQ8TF44 421 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 RPUSD4Q96CM3 377 aaKnown RBP2.7□□□□□ -1.98
LPP-221ENST00000618621 FLRT3Q9NZU0 649 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 ABCA2Q9BZC7 2435 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 LRRK1Q38SD2 2015 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 EIF4EBP3O60516 100 aaPredicted RBP2.7□□□□□ -1.98
LPP-221ENST00000618621 OR5AL1P0C617 328 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 COX19Q49B96 90 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 NHLRC3Q5JS37 347 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 SPANXB1Q9NS25 103 aaPredicted RBP2.7□□□□□ -1.98
LPP-221ENST00000618621 ZNF835Q9Y2P0 537 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 KIAA1217Q5T5P2 1943 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 LOXHD1Q8IVV2 1947 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 TRBV5-7A0A0A0MS05 114 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 NGFRP08138 427 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 VDAC1P21796 283 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 ROM1Q03395 351 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 SMIM21Q3B7S5 101 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 GPR119Q8TDV5 335 aa2.7□□□□□ -1.98
LPP-221ENST00000618621 ASB5Q8WWX0 329 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms