RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 VHLP40337 213 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 GLP1RP43220 463 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 DYNC1I2Q13409 638 aaKnown RBP12.98□□□□□ -0.33
BRCA1-228ENST00000618469 SLC22A6Q4U2R8 563 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 ZNF626Q68DY1 528 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 AWAT2Q6E213 333 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 LHFPL4Q7Z7J7 247 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 OSR2Q8N2R0 312 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 NKAIN3Q8N8D7 197 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 Q8NFD4 153 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 OR5R1Q8NH85 324 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 UFD1Q92890 307 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 AJUBAQ96IF1 538 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 ZNF581Q9P0T4 197 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 ST3GAL6Q9Y274 331 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 MRPS28Q9Y2Q9 187 aaKnown RBP12.98□□□□□ -0.33
BRCA1-228ENST00000618469 VWFP04275 2813 aa12.98□□□□□ -0.33
BRCA1-228ENST00000618469 IGHV2-26A0A0B4J1V2 119 aa12.97□□□□□ -0.33
BRCA1-228ENST00000618469 ZNF780AO75290 641 aaPredicted RBP12.97□□□□□ -0.33
BRCA1-228ENST00000618469 HSMCR30P0CW71 290 aa12.97□□□□□ -0.33
BRCA1-228ENST00000618469 RPL15P61313 204 aaKnown RBP12.97□□□□□ -0.33
BRCA1-228ENST00000618469 RELBQ01201 579 aa12.97□□□□□ -0.33
BRCA1-228ENST00000618469 LRRC75BQ2VPJ9 315 aa12.97□□□□□ -0.33
BRCA1-228ENST00000618469 PLA1AQ53H76 456 aa12.97□□□□□ -0.33
BRCA1-228ENST00000618469 NHLRC3Q5JS37 347 aa12.97□□□□□ -0.33
BRCA1-228ENST00000618469 FAM27D1Q5T7N8 215 aa12.97□□□□□ -0.33
BRCA1-228ENST00000618469 LIPKQ5VXJ0 399 aa12.97□□□□□ -0.33
BRCA1-228ENST00000618469 DHRS7BQ6IAN0 325 aaPredicted RBP12.97□□□□□ -0.33
BRCA1-228ENST00000618469 GDPGP1Q6ZNW5 385 aa12.97□□□□□ -0.33
BRCA1-228ENST00000618469 MS4A15Q8N5U1 240 aa12.97□□□□□ -0.33
BRCA1-228ENST00000618469 OR4F5Q8NH21 305 aa12.97□□□□□ -0.33
BRCA1-228ENST00000618469 FOXRED1Q96CU9 486 aaPredicted RBP12.97□□□□□ -0.33
BRCA1-228ENST00000618469 SSX3Q99909 188 aa12.97□□□□□ -0.33
BRCA1-228ENST00000618469 TMEM133Q9H2Q1 129 aa12.97□□□□□ -0.33
BRCA1-228ENST00000618469 BLOC1S6Q9UL45 172 aa12.97□□□□□ -0.33
BRCA1-228ENST00000618469 RAB26Q9ULW5 256 aa12.97□□□□□ -0.33
BRCA1-228ENST00000618469 TBL2Q9Y4P3 447 aaKnown RBP12.97□□□□□ -0.33
BRCA1-228ENST00000618469 FAM172BPA6NC97 362 aa12.96□□□□□ -0.33
BRCA1-228ENST00000618469 GEMIN2O14893 280 aaKnown RBP12.96□□□□□ -0.33
BRCA1-228ENST00000618469 MMP23AO75900 390 aa12.96□□□□□ -0.33
BRCA1-228ENST00000618469 NDUFA7O95182 113 aa12.96□□□□□ -0.33
BRCA1-228ENST00000618469 CDK2P24941 298 aa12.96□□□□□ -0.33
BRCA1-228ENST00000618469 SRSF4Q08170 494 aaKnown RBP12.96□□□□□ -0.33
BRCA1-228ENST00000618469 ACSM3Q53FZ2 586 aa12.96□□□□□ -0.33
BRCA1-228ENST00000618469 RBM48Q5RL73 367 aaKnown RBP12.96□□□□□ -0.33
BRCA1-228ENST00000618469 GLIPR1L1Q6UWM5 242 aa12.96□□□□□ -0.33
BRCA1-228ENST00000618469 PRSS48Q7RTY5 328 aa12.96□□□□□ -0.33
BRCA1-228ENST00000618469 LINC00596Q86U02 117 aa12.96□□□□□ -0.33
BRCA1-228ENST00000618469 OR11H6Q8NGC7 330 aa12.96□□□□□ -0.33
BRCA1-228ENST00000618469 PLPPR1Q8TBJ4 325 aa12.96□□□□□ -0.33
BRCA1-228ENST00000618469 DPCDQ9BVM2 203 aaPredicted RBP12.96□□□□□ -0.33
BRCA1-228ENST00000618469 CLEC7AQ9BXN2 247 aa12.96□□□□□ -0.33
BRCA1-228ENST00000618469 TCF7L1Q9HCS4 588 aa12.96□□□□□ -0.33
BRCA1-228ENST00000618469 TAS2R3Q9NYW6 316 aa12.96□□□□□ -0.33
BRCA1-228ENST00000618469 KIF25Q9UIL4 384 aa12.96□□□□□ -0.33
BRCA1-228ENST00000618469 MEIKINA0A087WXM9 373 aa12.95□□□□□ -0.34
BRCA1-228ENST00000618469 GTF2F2P13984 249 aa12.95□□□□□ -0.34
BRCA1-228ENST00000618469 GDNFP39905 211 aa12.95□□□□□ -0.34
BRCA1-228ENST00000618469 MAP2K4P45985 399 aa12.95□□□□□ -0.34
BRCA1-228ENST00000618469 KCNJ3P48549 501 aa12.95□□□□□ -0.34
BRCA1-228ENST00000618469 LY6EQ16553 131 aa12.95□□□□□ -0.34
BRCA1-228ENST00000618469 MPV17LQ2QL34 196 aa12.95□□□□□ -0.34
BRCA1-228ENST00000618469 ATAD3CQ5T2N8 411 aa12.95□□□□□ -0.34
BRCA1-228ENST00000618469 RSBN1Q5VWQ0 802 aaPredicted RBP12.95□□□□□ -0.34
BRCA1-228ENST00000618469 HIST2H2BDQ6DRA6 164 aa12.95□□□□□ -0.34
BRCA1-228ENST00000618469 BAIAP2L2Q6UXY1 529 aa12.95□□□□□ -0.34
BRCA1-228ENST00000618469 HEPN1Q6WQI6 88 aa12.95□□□□□ -0.34
BRCA1-228ENST00000618469 DYNAPQ8N1N2 210 aa12.95□□□□□ -0.34
BRCA1-228ENST00000618469 SUMF2Q8NBJ7 301 aa12.95□□□□□ -0.34
BRCA1-228ENST00000618469 OR4D6Q8NGJ1 314 aa12.95□□□□□ -0.34
BRCA1-228ENST00000618469 CORO2AQ92828 525 aa12.95□□□□□ -0.34
BRCA1-228ENST00000618469 MEGF9Q9H1U4 602 aa12.95□□□□□ -0.34
BRCA1-228ENST00000618469 PCDHB16Q9NRJ7 776 aa12.95□□□□□ -0.34
BRCA1-228ENST00000618469 OR6C3Q9NZP0 311 aa12.95□□□□□ -0.34
BRCA1-228ENST00000618469 FAM90A8PA6NJQ4 464 aa12.94□□□□□ -0.34
BRCA1-228ENST00000618469 ZNF729A6NN14 1252 aaPredicted RBP12.94□□□□□ -0.34
BRCA1-228ENST00000618469 RPS25P62851 125 aaKnown RBP12.94□□□□□ -0.34
BRCA1-228ENST00000618469 MLLT11Q13015 90 aaPredicted RBP12.94□□□□□ -0.34
BRCA1-228ENST00000618469 GPR176Q14439 515 aa12.94□□□□□ -0.34
BRCA1-228ENST00000618469 TBCEQ15813 527 aaPredicted RBP12.94□□□□□ -0.34
BRCA1-228ENST00000618469 FAM189A2Q15884 450 aa12.94□□□□□ -0.34
BRCA1-228ENST00000618469 HSD17B12Q53GQ0 312 aa12.94□□□□□ -0.34
BRCA1-228ENST00000618469 LDLRAD2Q5SZI1 272 aa12.94□□□□□ -0.34
BRCA1-228ENST00000618469 OR52W1Q6IF63 320 aa12.94□□□□□ -0.34
BRCA1-228ENST00000618469 CEACAM19Q7Z692 300 aa12.94□□□□□ -0.34
BRCA1-228ENST00000618469 CDH26Q8IXH8 852 aa12.94□□□□□ -0.34
BRCA1-228ENST00000618469 OR13A1Q8NGR1 328 aa12.94□□□□□ -0.34
BRCA1-228ENST00000618469 NDNFQ8TB73 568 aa12.94□□□□□ -0.34
BRCA1-228ENST00000618469 NEK7Q8TDX7 302 aa12.94□□□□□ -0.34
BRCA1-228ENST00000618469 TMEM203Q969S6 136 aa12.94□□□□□ -0.34
BRCA1-228ENST00000618469 BARHL1Q9BZE3 327 aa12.94□□□□□ -0.34
BRCA1-228ENST00000618469 IFT22Q9H7X7 185 aa12.94□□□□□ -0.34
BRCA1-228ENST00000618469 BEX1Q9HBH7 125 aa12.94□□□□□ -0.34
BRCA1-228ENST00000618469 MMP24Q9Y5R2 645 aa12.94□□□□□ -0.34
BRCA1-228ENST00000618469 KIAA2026Q5HYC2 2103 aa12.94□□□□□ -0.34
BRCA1-228ENST00000618469 A0A1B0GUS0 222 aa12.93□□□□□ -0.34
BRCA1-228ENST00000618469 RRP9O43818 475 aaKnown RBP12.93□□□□□ -0.34
BRCA1-228ENST00000618469 CRTAPO75718 401 aaPredicted RBP12.93□□□□□ -0.34
BRCA1-228ENST00000618469 GP2P55259 537 aaKnown RBP12.93□□□□□ -0.34
BRCA1-228ENST00000618469 GPR50Q13585 617 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms