RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 MBP02144 154 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 ZNF708P17019 499 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 MSL2Q9HCI7 577 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 ERRFI1Q9UJM3 462 aaPredicted RBP12.07□□□□□ -0.48
CIITA-213ENST00000618327 NSG2Q9Y328 171 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 FANCMQ8IYD8 2048 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 ZNHIT1O43257 154 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 UCP2P55851 309 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 BTNL8Q6UX41 500 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 NECAP1Q8NC96 275 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 CMTM2Q8TAZ6 248 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 RPS4Y2Q8TD47 263 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 SMIM7Q9BQ49 75 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 MYOZ1Q9NP98 299 aaPredicted RBP12.07□□□□□ -0.48
CIITA-213ENST00000618327 DEPPQ9NTK1 212 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 ANXA10Q9UJ72 324 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 MEX3AA1L020 520 aaKnown RBP12.07□□□□□ -0.48
CIITA-213ENST00000618327 RAB27BO00194 218 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 PPP1R1AQ13522 171 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 HFEQ30201 348 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 PIGYQ3MUY2 71 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 ZNF385CQ66K41 422 aaPredicted RBP12.07□□□□□ -0.48
CIITA-213ENST00000618327 MUC20Q8N307 709 aaPredicted RBP12.07□□□□□ -0.48
CIITA-213ENST00000618327 SLC35G3Q8N808 338 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 RXFP4Q8TDU9 374 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 ASB13Q8WXK3 278 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 TMEM45BQ96B21 275 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 LANCL1O43813 399 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 HOXB1P14653 301 aaPredicted RBP12.07□□□□□ -0.48
CIITA-213ENST00000618327 SNAI3Q3KNW1 292 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 WNT5BQ9H1J7 359 aa12.07□□□□□ -0.48
CIITA-213ENST00000618327 A0A1W2PPQ1 181 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 OR10J4P0C629 311 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 CEACAM6P40199 344 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 IFITM3Q01628 133 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 HES1Q14469 280 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 SP6Q3SY56 376 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 GTF2H5Q6ZYL4 71 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 PLPPR2Q96GM1 343 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 LINC00470Q9BZP3 86 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 C2orf16Q68DN1 1984 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 G3V3Q6 166 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 CDK2AP1O14519 115 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 METTL15P1P0C7V9 234 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 CTSSP25774 331 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 S100A7P31151 101 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 MPV17LQ2QL34 196 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 SIGLECL1Q8N7X8 197 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 LRFN3Q9BTN0 628 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 TMPRSS5Q9H3S3 457 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 GP6Q9HCN6 339 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 LY6G6EA0A0G2JKS1 128 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 BCL2L11O43521 198 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 ZP3P21754 424 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 KLF9Q13886 244 aaPredicted RBP12.06□□□□□ -0.48
CIITA-213ENST00000618327 OR10V1Q8NGI7 309 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 CTDSP1Q9GZU7 261 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 ZNF552Q9H707 407 aaPredicted RBP12.06□□□□□ -0.48
CIITA-213ENST00000618327 RHOFQ9HBH0 211 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 U3KQA8 63 aa12.06□□□□□ -0.48
CIITA-213ENST00000618327 NEURL1O76050 574 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 LIMK1P53667 647 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 CLEC12BQ2HXU8 276 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 NHLRC1Q6VVB1 395 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 C1orf174Q8IYL3 243 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 NPAS1Q99742 590 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 OR51I2Q9H344 312 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 ZNF107Q9UII5 783 aaPredicted RBP12.05□□□□□ -0.48
CIITA-213ENST00000618327 INHBBP09529 407 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 FABP9Q0Z7S8 132 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 RTL8BQ17RB0 113 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 CEACAM21Q3KPI0 293 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 TIGITQ495A1 244 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 SPANXN5Q5MJ07 72 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 C1orf100Q5SVJ3 147 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 OR4F5Q8NH21 305 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 SAT2Q96F10 170 aaPredicted RBP12.05□□□□□ -0.48
CIITA-213ENST00000618327 OR4F4Q96R69 305 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 COX5BP10606 129 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 AKR1C3P42330 323 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 KCNJ3P48549 501 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 PLA1AQ53H76 456 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 SSX8Q7RTT4 187 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 MOGAT3Q86VF5 341 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 ZFP62Q8NB50 900 aaPredicted RBP12.05□□□□□ -0.48
CIITA-213ENST00000618327 OR5D13Q8NGL4 314 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 OR13D1Q8NGV5 346 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 TMEM210A6NLX4 147 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 THNSL2Q86YJ6 484 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 OR5B3Q8NH48 314 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 LAMP3Q9UQV4 416 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 SSUH2Q9Y2M2 353 aa12.05□□□□□ -0.48
CIITA-213ENST00000618327 SPP1P10451 314 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 TRAT1Q6PIZ9 186 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 SSX7Q7RTT5 188 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 PIK3IP1Q96FE7 263 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 CLDN16Q9Y5I7 305 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 SFT2D2O95562 160 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 HAND1O96004 215 aa12.04□□□□□ -0.48
CIITA-213ENST00000618327 HLA-DQB1P01920 261 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms