RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 RBMXP38159 391 aaKnown RBP14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 HOXA4Q00056 320 aaPredicted RBP14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 HERPUD1Q15011 391 aa14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 MSMPQ1L6U9 139 aa14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 ABCA11PQ4W5N1 156 aa14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 OR8H3Q8N146 312 aa14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 SNRNP40Q96DI7 357 aaKnown RBP14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 METTL8Q9H825 291 aaKnown RBP14.7□□□□□ -0.06
PCDHGC3-205ENST00000617641 A0A0G2JNJ9 132 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 A8MXE2 369 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 TRDCB7Z8K6 153 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 PPYP01298 95 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 IFNA7P01567 189 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 HOXB5P09067 269 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 SLC25A4P12235 298 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 RBM39Q14498 530 aaKnown RBP14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 PRAMEF6Q5VXH4 476 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 RGS7BPQ6MZT1 257 aaPredicted RBP14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 C11orf53Q8IXP5 236 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 GTF3AQ92664 365 aaKnown RBP14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 NMES1Q9C002 83 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 Q9UFV3 132 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 ATP23Q9Y6H3 246 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 ZGRF1Q86YA3 2104 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 PTPRQQ9UMZ3 2332 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 PAN3Q58A45 887 aaKnown RBP14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 TMEM65Q6PI78 240 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 PIK3IP1Q96FE7 263 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 OR10C1Q96KK4 312 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 RIMS4Q9H426 269 aaPredicted RBP14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 SLC2A9Q9NRM0 540 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 ASF1BQ9NVP2 202 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 MBD2Q9UBB5 411 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 TNFSF18Q9UNG2 199 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 RAXQ9Y2V3 346 aa14.69□□□□□ -0.06
PCDHGC3-205ENST00000617641 IGKV1-6A0A0C4DH72 117 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 KIR2DS1A0A191URI9 304 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 A6NLC8 198 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 SLC33A1O00400 549 aaPredicted RBP14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 WNT9BO14905 357 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 GLAP06280 429 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 RCC1P18754 421 aaPredicted RBP14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 KIR2DS4P43632 304 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 UCP3P55916 312 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 TMPRSS3P57727 454 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 KIR2DS1Q14954 304 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 SP6Q3SY56 376 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 C22orf34Q6ZV56 151 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 LRP11Q86VZ4 500 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 SLC38A6Q8IZM9 456 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 POC1AQ8NBT0 407 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 OR11L1Q8NGX0 322 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 RTN4IP1Q8WWV3 396 aaPredicted RBP14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 NAA60Q9H7X0 242 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 UFSP2Q9NUQ7 469 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 C1orf123Q9NWV4 160 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 UBQLN2Q9UHD9 624 aa14.68□□□□□ -0.06
PCDHGC3-205ENST00000617641 RP2O75695 350 aa14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 TK1P04183 234 aa14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 PSMB6P28072 239 aa14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 CEBPDP49716 269 aaPredicted RBP14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 ZNF146Q15072 292 aa14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 THAP6Q8TBB0 222 aa14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 PLPPR1Q8TBJ4 325 aa14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 RASL12Q9NYN1 266 aa14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 DUSP13Q9UII6 198 aa14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 TRBV6-6A0A0A6YYG2 114 aa14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 CRYAAP02489 173 aa14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 CYCSP99999 105 aaKnown RBP14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 ZNF880Q6PDB4 577 aa14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 FAM219AQ8IW50 185 aa14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 C1orf174Q8IYL3 243 aa14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 PCNPQ8WW12 178 aaKnown RBP14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 RSRP1Q9BUV0 290 aa14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 OR14J1Q9UGF5 321 aa14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 TMA7Q9Y2S6 64 aaKnown RBP14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 MAB21L2Q9Y586 359 aa14.67□□□□□ -0.06
PCDHGC3-205ENST00000617641 TRAV39A0A0B4J263 110 aa14.66□□□□□ -0.06
PCDHGC3-205ENST00000617641 SH2D1BO14796 132 aa14.66□□□□□ -0.06
PCDHGC3-205ENST00000617641 OR5AC1P0C628 307 aa14.66□□□□□ -0.06
PCDHGC3-205ENST00000617641 HES4Q9HCC6 221 aa14.66□□□□□ -0.06
PCDHGC3-205ENST00000617641 RNF222A6NCQ9 220 aa14.66□□□□□ -0.06
PCDHGC3-205ENST00000617641 KCNAB3O43448 404 aa14.66□□□□□ -0.06
PCDHGC3-205ENST00000617641 DIRAS3O95661 229 aa14.66□□□□□ -0.06
PCDHGC3-205ENST00000617641 ACAA1P09110 424 aaPredicted RBP14.66□□□□□ -0.06
PCDHGC3-205ENST00000617641 CCKARP32238 428 aa14.66□□□□□ -0.06
PCDHGC3-205ENST00000617641 VHLLQ6RSH7 139 aa14.66□□□□□ -0.06
PCDHGC3-205ENST00000617641 WDR82Q6UXN9 313 aa14.66□□□□□ -0.06
PCDHGC3-205ENST00000617641 SECTM1Q8WVN6 248 aa14.66□□□□□ -0.06
PCDHGC3-205ENST00000617641 TLNRD1Q9H1K6 362 aa14.66□□□□□ -0.06
PCDHGC3-205ENST00000617641 ZNF835Q9Y2P0 537 aa14.66□□□□□ -0.06
PCDHGC3-205ENST00000617641 KCNIP3Q9Y2W7 256 aa14.66□□□□□ -0.06
PCDHGC3-205ENST00000617641 HAND1O96004 215 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 HLA-DRB3P79483 266 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 TMEM187Q14656 261 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 C3orf36Q3SXR2 165 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 BEX5Q5H9J7 111 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 SPIN3Q5JUX0 258 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 SPERTQ8NA61 448 aa14.65□□□□□ -0.06
PCDHGC3-205ENST00000617641 C2orf50Q96LR7 162 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms