RNA–Protein interactions for RNA: ENST00000617451.4

PTPRF-216, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5 BASIC

Gene PTPRF, Length 1,129 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-216ENST00000617451 SNRNP70P08621 437 aaKnown RBP19.74■□□□□ 0.75
PTPRF-216ENST00000617451 OR51D1Q8NGF3 324 aa19.74■□□□□ 0.75
PTPRF-216ENST00000617451 TOMM40LQ969M1 308 aa19.74■□□□□ 0.75
PTPRF-216ENST00000617451 PELI1Q96FA3 418 aa19.74■□□□□ 0.75
PTPRF-216ENST00000617451 ZNF649Q9BS31 505 aa19.74■□□□□ 0.75
PTPRF-216ENST00000617451 AMMECR1Q9Y4X0 333 aaPredicted RBP19.74■□□□□ 0.75
PTPRF-216ENST00000617451 E9PQ18 207 aa19.73■□□□□ 0.75
PTPRF-216ENST00000617451 J3QR06 171 aa19.73■□□□□ 0.75
PTPRF-216ENST00000617451 THBS3P49746 956 aa19.73■□□□□ 0.75
PTPRF-216ENST00000617451 ZP1P60852 638 aa19.73■□□□□ 0.75
PTPRF-216ENST00000617451 RPL23AP62750 156 aaKnown RBP19.73■□□□□ 0.75
PTPRF-216ENST00000617451 SLC25A30Q5SVS4 291 aa19.73■□□□□ 0.75
PTPRF-216ENST00000617451 ZNF565Q8N9K5 539 aa19.73■□□□□ 0.75
PTPRF-216ENST00000617451 OR56B4Q8NH76 319 aa19.73■□□□□ 0.75
PTPRF-216ENST00000617451 DPF1Q92782 380 aa19.73■□□□□ 0.75
PTPRF-216ENST00000617451 CENPNQ96H22 339 aaPredicted RBP19.73■□□□□ 0.75
PTPRF-216ENST00000617451 NCOR1P1Q9H4R4 102 aa19.73■□□□□ 0.75
PTPRF-216ENST00000617451 LINC00574Q9H8X3 128 aa19.73■□□□□ 0.75
PTPRF-216ENST00000617451 IMPAD1Q9NX62 359 aa19.73■□□□□ 0.75
PTPRF-216ENST00000617451 J3QLW9 94 aa19.72■□□□□ 0.75
PTPRF-216ENST00000617451 TMEM225BP0DP42 221 aa19.72■□□□□ 0.75
PTPRF-216ENST00000617451 DBTP11182 482 aaKnown RBP19.72■□□□□ 0.75
PTPRF-216ENST00000617451 ZNF19P17023 458 aa19.72■□□□□ 0.75
PTPRF-216ENST00000617451 CD69Q07108 199 aa19.72■□□□□ 0.75
PTPRF-216ENST00000617451 BNIP1Q12981 228 aa19.72■□□□□ 0.75
PTPRF-216ENST00000617451 ALKBH1Q13686 389 aaKnown RBP19.72■□□□□ 0.75
PTPRF-216ENST00000617451 KISS1Q15726 138 aa19.72■□□□□ 0.75
PTPRF-216ENST00000617451 OR2W3Q7Z3T1 314 aa19.72■□□□□ 0.75
PTPRF-216ENST00000617451 DRAM1Q8N682 238 aa19.72■□□□□ 0.75
PTPRF-216ENST00000617451 C5orf56Q8N8D9 126 aa19.72■□□□□ 0.75
PTPRF-216ENST00000617451 CHPT1Q8WUD6 406 aa19.72■□□□□ 0.75
PTPRF-216ENST00000617451 NOL4LQ96MY1 436 aaPredicted RBP19.72■□□□□ 0.75
PTPRF-216ENST00000617451 B9D2Q9BPU9 175 aa19.72■□□□□ 0.75
PTPRF-216ENST00000617451 CALYQ9NYX4 217 aa19.72■□□□□ 0.75
PTPRF-216ENST00000617451 KIF25Q9UIL4 384 aa19.72■□□□□ 0.75
PTPRF-216ENST00000617451 A0A1W2PPI3 338 aa19.71■□□□□ 0.75
PTPRF-216ENST00000617451 H0YJX3 145 aa19.71■□□□□ 0.75
PTPRF-216ENST00000617451 HSPB6O14558 160 aa19.71■□□□□ 0.75
PTPRF-216ENST00000617451 GLP1RP43220 463 aa19.71■□□□□ 0.75
PTPRF-216ENST00000617451 MTNR1BP49286 362 aa19.71■□□□□ 0.75
PTPRF-216ENST00000617451 C1orf146Q5VVC0 180 aa19.71■□□□□ 0.75
PTPRF-216ENST00000617451 ACBD7Q8N6N7 88 aa19.71■□□□□ 0.75
PTPRF-216ENST00000617451 OR13A1Q8NGR1 328 aa19.71■□□□□ 0.75
PTPRF-216ENST00000617451 LEAP2Q969E1 77 aa19.71■□□□□ 0.75
PTPRF-216ENST00000617451 C4orf36Q96KX1 117 aa19.71■□□□□ 0.75
PTPRF-216ENST00000617451 MCRIP2Q9BUT9 160 aaKnown RBP19.71■□□□□ 0.75
PTPRF-216ENST00000617451 ZFP57Q9NU63 452 aa19.71■□□□□ 0.75
PTPRF-216ENST00000617451 MEIKINA0A087WXM9 373 aa19.7■□□□□ 0.74
PTPRF-216ENST00000617451 TRAV24A0A0B4J272 114 aa19.7■□□□□ 0.74
PTPRF-216ENST00000617451 IGHV3-7P01780 117 aa19.7■□□□□ 0.74
PTPRF-216ENST00000617451 HCKP08631 526 aa19.7■□□□□ 0.74
PTPRF-216ENST00000617451 C21orf33P30042 268 aaPredicted RBP19.7■□□□□ 0.74
PTPRF-216ENST00000617451 SLC6A1P30531 599 aa19.7■□□□□ 0.74
PTPRF-216ENST00000617451 SNRPGP62308 76 aaKnown RBP19.7■□□□□ 0.74
PTPRF-216ENST00000617451 MADCAM1Q13477 382 aa19.7■□□□□ 0.74
PTPRF-216ENST00000617451 DIAPH2-AS1Q14236 149 aa19.7■□□□□ 0.74
PTPRF-216ENST00000617451 HES1Q14469 280 aa19.7■□□□□ 0.74
PTPRF-216ENST00000617451 PAN3Q58A45 887 aaKnown RBP19.7■□□□□ 0.74
PTPRF-216ENST00000617451 ELP2Q6IA86 826 aa19.7■□□□□ 0.74
PTPRF-216ENST00000617451 C18orf65Q6ZTR6 163 aa19.7■□□□□ 0.74
PTPRF-216ENST00000617451 SERPINA12Q8IW75 414 aa19.7■□□□□ 0.74
PTPRF-216ENST00000617451 OR5D14Q8NGL3 314 aa19.7■□□□□ 0.74
PTPRF-216ENST00000617451 IDI2-AS1Q9NZ38 188 aa19.7■□□□□ 0.74
PTPRF-216ENST00000617451 PSG11Q9UQ72 335 aa19.7■□□□□ 0.74
PTPRF-216ENST00000617451 EXOGQ9Y2C4 368 aaKnown RBP19.7■□□□□ 0.74
PTPRF-216ENST00000617451 SAC3D1A6NKF1 404 aa19.69■□□□□ 0.74
PTPRF-216ENST00000617451 NPIPB11E5RHQ5 1161 aa19.69■□□□□ 0.74
PTPRF-216ENST00000617451 FGF16O43320 207 aa19.69■□□□□ 0.74
PTPRF-216ENST00000617451 SULT1B1O43704 296 aa19.69■□□□□ 0.74
PTPRF-216ENST00000617451 IL1AP01583 271 aa19.69■□□□□ 0.74
PTPRF-216ENST00000617451 TMEM11P17152 192 aa19.69■□□□□ 0.74
PTPRF-216ENST00000617451 MEDAGQ5VYS4 303 aa19.69■□□□□ 0.74
PTPRF-216ENST00000617451 C8orf86Q6ZUL3 223 aa19.69■□□□□ 0.74
PTPRF-216ENST00000617451 PARP16Q8N5Y8 322 aa19.69■□□□□ 0.74
PTPRF-216ENST00000617451 CNIH3Q8TBE1 160 aa19.69■□□□□ 0.74
PTPRF-216ENST00000617451 HAVCR2Q8TDQ0 301 aa19.69■□□□□ 0.74
PTPRF-216ENST00000617451 NR1H4Q96RI1 486 aaPredicted RBP19.69■□□□□ 0.74
PTPRF-216ENST00000617451 BARHL1Q9BZE3 327 aa19.69■□□□□ 0.74
PTPRF-216ENST00000617451 SERPINE3A8MV23 424 aa19.68■□□□□ 0.74
PTPRF-216ENST00000617451 CCDC159P0C7I6 412 aa19.68■□□□□ 0.74
PTPRF-216ENST00000617451 VSIG8P0DPA2 414 aa19.68■□□□□ 0.74
PTPRF-216ENST00000617451 MYCNOSP40205 109 aa19.68■□□□□ 0.74
PTPRF-216ENST00000617451 RAB7AP51149 207 aa19.68■□□□□ 0.74
PTPRF-216ENST00000617451 PAX5Q02548 391 aa19.68■□□□□ 0.74
PTPRF-216ENST00000617451 HNF4GQ14541 408 aa19.68■□□□□ 0.74
PTPRF-216ENST00000617451 ZNF691Q5VV52 312 aa19.68■□□□□ 0.74
PTPRF-216ENST00000617451 OR8H3Q8N146 312 aa19.68■□□□□ 0.74
PTPRF-216ENST00000617451 PXT1Q8NFP0 134 aa19.68■□□□□ 0.74
PTPRF-216ENST00000617451 P2RX4Q99571 388 aa19.68■□□□□ 0.74
PTPRF-216ENST00000617451 IGHG2P01859 326 aa19.67■□□□□ 0.74
PTPRF-216ENST00000617451 RSBN1Q5VWQ0 802 aaPredicted RBP19.67■□□□□ 0.74
PTPRF-216ENST00000617451 SLC16A12Q6ZSM3 486 aa19.67■□□□□ 0.74
PTPRF-216ENST00000617451 RFESDQ8TAC1 157 aa19.67■□□□□ 0.74
PTPRF-216ENST00000617451 LGALS12Q96DT0 336 aa19.67■□□□□ 0.74
PTPRF-216ENST00000617451 WWC2-AS2Q96NR7 200 aa19.67■□□□□ 0.74
PTPRF-216ENST00000617451 LINC00527Q9UJ94 153 aa19.67■□□□□ 0.74
PTPRF-216ENST00000617451 NUDT19A8MXV4 375 aa19.66■□□□□ 0.74
PTPRF-216ENST00000617451 ZFPL1O95159 310 aa19.66■□□□□ 0.74
PTPRF-216ENST00000617451 IGKV1D-33P01593 117 aa19.66■□□□□ 0.74
PTPRF-216ENST00000617451 IGKV1-33P01594 117 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms