RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 SHARPINQ9H0F6 387 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 HIPK2Q9H2X6 1198 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 ZNF71Q9NQZ8 489 aaPredicted RBP11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 SLC2A8Q9NY64 477 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 NBASA2RRP1 2371 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 HEXAP06865 529 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 NMBP08949 121 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 RPL19P84098 196 aaKnown RBP11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 ZNF660Q6AZW8 331 aaPredicted RBP11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 RAB39BQ96DA2 213 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 STRAPQ9Y3F4 350 aaKnown RBP11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 KPTNQ9Y664 436 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 IGHV3-43A0A0B4J1X8 118 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 LOC390937A0A1W2PQ73 354 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 IGHV3-43DP0DP04 118 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 P2RY4P51582 365 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 ANKRD55Q3KP44 614 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 OVCH2Q7RTZ1 564 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 NUDT16L1Q9BRJ7 211 aaKnown RBP11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 PRDM14Q9GZV8 571 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 PIPOXQ9P0Z9 390 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 FAM96BQ9Y3D0 163 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 V9GYS6 101 aa11.41□□□□□ -0.58
PPP4R3B-206ENST00000616407 WDR87Q6ZQQ6 2873 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 FGF12P61328 243 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 PJVKQ0ZLH3 352 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 INO80CQ6PI98 192 aaPredicted RBP11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 HSD17B13Q7Z5P4 300 aaPredicted RBP11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 ZIC4Q8N9L1 334 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 OR5C1Q8NGR4 320 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 OR10Z1Q8NGY1 313 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 ABHD5Q8WTS1 349 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 EDARADDQ8WWZ3 215 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 PLEKHA3Q9HB20 300 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 OR5AC2Q9NZP5 309 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 PURGQ9UJV8 347 aaKnown RBP11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 LY6G6EA0A0G2JKS1 128 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 PINLYPA6NC86 204 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 NKX6-3A6NJ46 265 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 ZNF528Q3MIS6 628 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 U3KQA8 63 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 DOCK7Q96N67 2140 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 MDH2P40926 338 aaKnown RBP11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 ZNF345Q14585 488 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 IL13RA2Q14627 380 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 CST9LP1Q5W188 147 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 BVESQ8NE79 360 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 CXXC4Q9H2H0 198 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 CACNG5Q9UF02 275 aa11.4□□□□□ -0.58
PPP4R3B-206ENST00000616407 RPS10-NUDT3A0A1W2PQS6 291 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 CLEC18AA5D8T8 446 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 RNASEK-C17orf49H0YIS7 233 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 SCTP09683 121 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 RPS10P46783 165 aaKnown RBP11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 MIDNQ504T8 468 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 CLEC18CQ8NCF0 446 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 ERGIC1Q969X5 290 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 SMCO4Q9NRQ5 59 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 HSF4Q9ULV5 492 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 TRGV8A0A0C4DH27 118 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 NKX2-6A6NCS4 301 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 PRSS44E7EML9 344 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 C3orf80F5H4A9 247 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 IGHV3-13P01766 116 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 IGHV3-7P01780 117 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 SIGIRRQ6IA17 410 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 SCCPDHQ8NBX0 429 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 OR10C1Q96KK4 312 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 LYZL4Q96KX0 146 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 NIPSNAP3BQ9BS92 247 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 GNG13Q9P2W3 67 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 LRRC3CA6NJW4 275 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 UMAD1C9J7I0 102 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 VDAC1P21796 283 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 LPAR6P43657 344 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 RPS16P62249 146 aaKnown RBP11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 PLGLAQ15195 96 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 RBMS3Q6XE24 437 aaKnown RBP11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 BHLHA15Q7RTS1 189 aaPredicted RBP11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 SLC35G3Q8N808 338 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 FDCSPQ8NFU4 85 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 OR1K1Q8NGR3 316 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 BIN3Q9NQY0 253 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 PSG11Q9UQ72 335 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 COL4A3Q01955 1670 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 ZNF407Q9C0G0 2248 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 ZNF716A6NP11 495 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 OR10P1Q8NGE3 313 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 C14orf79Q96F83 325 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 ADGRG7Q96K78 797 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 GCM1Q9NP62 436 aa11.39□□□□□ -0.59
PPP4R3B-206ENST00000616407 hCG_38984A0A1B0GV85 526 aa11.38□□□□□ -0.59
PPP4R3B-206ENST00000616407 C17orf112F2Z3M2 114 aa11.38□□□□□ -0.59
PPP4R3B-206ENST00000616407 MT-CO2P00403 227 aa11.38□□□□□ -0.59
PPP4R3B-206ENST00000616407 CD59P13987 128 aa11.38□□□□□ -0.59
PPP4R3B-206ENST00000616407 ALDH3B1P43353 468 aa11.38□□□□□ -0.59
PPP4R3B-206ENST00000616407 RAB5CP51148 216 aa11.38□□□□□ -0.59
PPP4R3B-206ENST00000616407 RAB11AP62491 216 aa11.38□□□□□ -0.59
PPP4R3B-206ENST00000616407 AKR1E2Q96JD6 320 aa11.38□□□□□ -0.59
PPP4R3B-206ENST00000616407 OR2D2Q9H210 308 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms