RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 DLEU1O43261 78 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 LCATP04180 440 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 IAPPP10997 89 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 OR1D5P58170 312 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 HNRNPKP61978 463 aaKnown RBP eCLIP11.44□□□□□ -0.58
MSH6-214ENST00000616033 GTF3C1Q12789 2109 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 CLN3Q13286 438 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 RTP5Q14D33 572 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 DBX2Q6ZNG2 339 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 LFNGQ8NES3 379 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 OR51H1Q8NH63 302 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 MALSU1Q96EH3 234 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 PARD6GQ9BYG4 376 aaPredicted RBP11.44□□□□□ -0.58
MSH6-214ENST00000616033 GLRX2Q9NS18 164 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 SEMA5BQ9P283 1151 aa11.44□□□□□ -0.58
MSH6-214ENST00000616033 WNT5AP41221 380 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 ZNF266Q14584 549 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 SNAI3Q3KNW1 292 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 CLEC2AQ6UVW9 174 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 ZNF66Q6ZN08 573 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 RNASE8Q8TDE3 154 aaKnown RBP11.43□□□□□ -0.58
MSH6-214ENST00000616033 BOD1Q96IK1 185 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 SYT3Q9BQG1 590 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 SLC25A31Q9H0C2 315 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 CLEC1BQ9P126 229 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 SVILO95425 2214 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 LIPT2A6NK58 231 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 B4E171 279 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 MSTNO14793 375 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 CHST1O43916 411 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 PMELP40967 661 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 CAPZBP47756 277 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 TMEM252Q8N6L7 170 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 GPR87Q9BY21 358 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 VSIRQ9H7M9 311 aa11.43□□□□□ -0.58
MSH6-214ENST00000616033 CTHP32929 405 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 P2RY6Q15077 328 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 PRSS8Q16651 343 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 THEM4Q5T1C6 240 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 NOXO1Q8NFA2 376 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 Q8NFD4 153 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 OR1N1Q8NGS0 311 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 PIGCQ92535 297 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 CALHM2Q9HA72 323 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 ST3GAL6Q9Y274 331 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 COL6A3P12111 3177 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 A0A0U1RQK1 487 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 XKRY2A2RUG3 117 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 RABIFP47224 123 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 RAB4BP61018 213 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 PMS2P11Q13670 270 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 COL13A1Q5TAT6 717 aaPredicted RBP11.42□□□□□ -0.58
MSH6-214ENST00000616033 CST9LP1Q5W188 147 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 ZNF837Q96EG3 531 aaPredicted RBP11.42□□□□□ -0.58
MSH6-214ENST00000616033 BORCS8Q96FH0 119 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 B3GAT1Q9P2W7 334 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 SPTY2D1-AS1A0A0U1RR47 76 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 GLIPR1P48060 266 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 OR1L3Q8NH93 324 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 PLK3Q9H4B4 646 aa11.42□□□□□ -0.58
MSH6-214ENST00000616033 TRBV11-1A0A0K0K1C0 115 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 CEACAM18A8MTB9 384 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 GABRG2P18507 467 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 C17orf67Q0P5P2 114 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 OR10G3Q8NGC4 313 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 VPS25Q9BRG1 176 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 MSL2Q9HCI7 577 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 PPP1R14DQ9NXH3 145 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 C3orf85A0A1B0GTC6 90 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 PROB1E7EW31 1015 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 M0R135 149 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 C1QL4Q86Z23 238 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 C11orf42Q8N5U0 333 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 OR1K1Q8NGR3 316 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 ZNF799Q96GE5 643 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 FOXJ2Q9P0K8 574 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 C2orf16Q68DN1 1984 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 A0A1B0GUS0 222 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 CLDN34H7C241 214 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 GZMBP10144 247 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 DCAF7P61962 342 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 COL10A1Q03692 680 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 ZNF787Q6DD87 383 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 Q6ZS52 159 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 DNAJC4Q9NNZ3 241 aa11.41□□□□□ -0.58
MSH6-214ENST00000616033 IGHV3-9P01782 118 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 YPEL5P62699 121 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 IL13RA2Q14627 380 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 RTL10Q7L3V2 364 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 TBC1D26Q86UD7 250 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 ST6GALNAC3Q8NDV1 305 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 RHBDD1Q8TEB9 315 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 IL1F10Q8WWZ1 152 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 KIAA1456Q9P272 454 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 ADAMTS9Q9P2N4 1935 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 AHCTF1Q8WYP5 2266 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 TRAV39A0A0B4J263 110 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 IGHV3-64DA0A0J9YX35 117 aa11.4□□□□□ -0.58
MSH6-214ENST00000616033 GALR2O43603 387 aaPredicted RBP11.4□□□□□ -0.58
MSH6-214ENST00000616033 TMEM50AO95807 157 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms