RNA–Protein interactions for RNA: ENST00000616000.4

STRA6-222, Transcript of stimulated by retinoic acid 6, human

APPRIS P1 TSL 2 BASIC

Gene STRA6, Length 2,843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRA6-222	ENST00000616000	IL18BP	O95998	194 aa		11.48	□□□□□ -0.57
STRA6-222	ENST00000616000	SUMO3	P55854	103 aa	Predicted RBP	11.48	□□□□□ -0.57
STRA6-222	ENST00000616000	LYZL2	Q7Z4W2	148 aa		11.48	□□□□□ -0.57
STRA6-222	ENST00000616000	OR2C3	Q8N628	320 aa		11.48	□□□□□ -0.57
STRA6-222	ENST00000616000	SNHG12	Q9BXW3	62 aa		11.48	□□□□□ -0.57
STRA6-222	ENST00000616000	GPR173	Q9NS66	373 aa		11.48	□□□□□ -0.57
STRA6-222	ENST00000616000	MMP9	P14780	707 aa		11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	ZNF133	P52736	654 aa	Predicted RBP	11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	MTCP1	P56278	107 aa		11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	RPL23A	P62750	156 aa	Known RBP	11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	SRPX	P78539	464 aa		11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	PHLDA2	Q53GA4	152 aa		11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	OR4D5	Q8NGN0	318 aa		11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	OR4X1	Q8NH49	305 aa		11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	P2RX4	Q99571	388 aa		11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	ZNF700	Q9H0M5	742 aa		11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	PLEKHF2	Q9H8W4	249 aa		11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	RCL1	Q9Y2P8	373 aa	Known RBP	11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	DLEU1	O43261	78 aa		11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	DUX1	O43812	170 aa		11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	TDGF1P3	P51864	188 aa		11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	TMEM18	Q96B42	140 aa		11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	OXGR1	Q96P68	337 aa		11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	CABLES2	Q9BTV7	478 aa		11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	CISD1	Q9NZ45	108 aa	Known RBP	11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	GOLT1B	Q9Y3E0	138 aa		11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	SDK2	Q58EX2	2172 aa		11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	EML6	Q6ZMW3	1958 aa		11.47	□□□□□ -0.57
STRA6-222	ENST00000616000	ZNF850	A8MQ14	1090 aa		11.46	□□□□□ -0.57
STRA6-222	ENST00000616000	GRB2	P62993	217 aa	Known RBP	11.46	□□□□□ -0.57
STRA6-222	ENST00000616000	BAX	Q07812	192 aa		11.46	□□□□□ -0.57
STRA6-222	ENST00000616000	PDCD1	Q15116	288 aa		11.46	□□□□□ -0.57
STRA6-222	ENST00000616000	OR52M1	Q8NGK5	317 aa		11.46	□□□□□ -0.57
STRA6-222	ENST00000616000	OR2AE1	Q8NHA4	323 aa		11.46	□□□□□ -0.57
STRA6-222	ENST00000616000	ANXA10	Q9UJ72	324 aa		11.46	□□□□□ -0.57
STRA6-222	ENST00000616000	SHANK1	Q9Y566	2161 aa		11.46	□□□□□ -0.57
STRA6-222	ENST00000616000	TMEM210	A6NLX4	147 aa		11.46	□□□□□ -0.58
STRA6-222	ENST00000616000	UCP3	P55916	312 aa		11.46	□□□□□ -0.58
STRA6-222	ENST00000616000	SNAI3	Q3KNW1	292 aa		11.46	□□□□□ -0.58
STRA6-222	ENST00000616000	ACSF3	Q4G176	576 aa	Predicted RBP	11.46	□□□□□ -0.58
STRA6-222	ENST00000616000	ABCA11P	Q4W5N1	156 aa		11.46	□□□□□ -0.58
STRA6-222	ENST00000616000	SLC35G3	Q8N808	338 aa		11.46	□□□□□ -0.58
STRA6-222	ENST00000616000	POM121	Q96HA1	1249 aa		11.46	□□□□□ -0.58
STRA6-222	ENST00000616000	P4HTM	Q9NXG6	502 aa		11.46	□□□□□ -0.58
STRA6-222	ENST00000616000	PTRH2	Q9Y3E5	179 aa	Known RBP	11.46	□□□□□ -0.58
STRA6-222	ENST00000616000	B3GALT1	Q9Y5Z6	326 aa		11.46	□□□□□ -0.58
STRA6-222	ENST00000616000	DHRS3	O75911	302 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	ZNF728	P0DKX0	622 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	FUT3	P21217	361 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	PRDX4	Q13162	271 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	HIST3H3	Q16695	136 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	C1orf194	Q5T5A4	169 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	FAM90A2P	Q658T7	463 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	ZFP62	Q8NB50	900 aa	Predicted RBP	11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	OR2M3	Q8NG83	312 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	OR5L1	Q8NGL2	311 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	OR11L1	Q8NGX0	322 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	HAS2	Q92819	552 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	ZNF837	Q96EG3	531 aa	Predicted RBP	11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	ZNF385A	Q96PM9	386 aa	Known RBP	11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	SDF2L1	Q9HCN8	221 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	NECAP2	Q9NVZ3	263 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	PIAS2	O75928	621 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	ZNF25	P17030	456 aa	Predicted RBP	11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	DTYMK	P23919	212 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	ENDOG	Q14249	297 aa	Known RBP	11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	MAML2	Q8IZL2	1156 aa	Predicted RBP	11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	BATF2	Q8N1L9	274 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	MSI2	Q96DH6	328 aa	Known RBP	11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	SPIN2A	Q99865	258 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	SPIN2B	Q9BPZ2	258 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	RBM24	Q9BX46	236 aa	Known RBP	11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	MYOT	Q9UBF9	498 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	KIR2DL5B	A0A0G2JN68	375 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	KIR2DL5B	A0A0G2JPC4	375 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	ETV2	O00321	342 aa	Predicted RBP	11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	IGLV3-1	P01715	115 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	CEBPG	P53567	150 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	NKAIN1	Q4KMZ8	207 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	SLC25A53	Q5H9E4	307 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	SYT13	Q7L8C5	426 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	KIR2DL5A	Q8N109	375 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	CCDC71L	Q8N9Z2	235 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	CA5BP1	Q8WTZ4	195 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000		Q96M66	194 aa		11.45	□□□□□ -0.58
STRA6-222	ENST00000616000	ZNF705G	A8MUZ8	300 aa	Predicted RBP	11.44	□□□□□ -0.58
STRA6-222	ENST00000616000	KCNMB1	Q16558	191 aa		11.44	□□□□□ -0.58
STRA6-222	ENST00000616000	BTNL3	Q6UXE8	466 aa		11.44	□□□□□ -0.58
STRA6-222	ENST00000616000	SLC25A45	Q8N413	288 aa		11.44	□□□□□ -0.58
STRA6-222	ENST00000616000	UCN2	Q96RP3	112 aa		11.44	□□□□□ -0.58
STRA6-222	ENST00000616000	LRFN1	Q9P244	771 aa		11.44	□□□□□ -0.58
STRA6-222	ENST00000616000	CCDC85C	A6NKD9	419 aa		11.44	□□□□□ -0.58
STRA6-222	ENST00000616000	TRDC	B7Z8K6	153 aa		11.44	□□□□□ -0.58
STRA6-222	ENST00000616000	MSR1	P21757	451 aa		11.44	□□□□□ -0.58
STRA6-222	ENST00000616000	G0S2	P27469	103 aa		11.44	□□□□□ -0.58
STRA6-222	ENST00000616000	GUCA1A	P43080	201 aa	Predicted RBP	11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms