RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 MICBQ29980 383 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 HFEQ30201 348 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 KRTAP24-1Q3LI83 254 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 PAN3Q58A45 887 aaKnown RBP9.55□□□□□ -0.88
SLIRP-212ENST00000613856 ATAD3CQ5T2N8 411 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 TRAPPC6BQ86SZ2 158 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 SUMF2Q8NBJ7 301 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 C19orf18Q8NEA5 215 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 ANGPTL6Q8NI99 470 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 SETD6Q8TBK2 473 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 RDH5Q92781 318 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 OCSTAMPQ9BR26 566 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 FAAP24Q9BTP7 215 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 DPCDQ9BVM2 203 aaPredicted RBP9.55□□□□□ -0.88
SLIRP-212ENST00000613856 GSX2Q9BZM3 304 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 CHST6Q9GZX3 395 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 DNTTIP1Q9H147 329 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 DCAF16Q9NXF7 216 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 TAS2R8Q9NYW2 309 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 TREM2Q9NZC2 230 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 OR14J1Q9UGF5 321 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 AK3Q9UIJ7 227 aa9.55□□□□□ -0.88
SLIRP-212ENST00000613856 ELF5Q9UKW6 265 aaPredicted RBP9.55□□□□□ -0.88
SLIRP-212ENST00000613856 DSCAML1Q8TD84 2053 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 PPIAL4EA0A075B759 164 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 TRBV6-6A0A0A6YYG2 114 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 TRAV38-1A0A0B4J264 116 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 ANKRD20A5PA0PJZ0 165 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 PPIAL4DF5H284 164 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 SIRPB1O00241 398 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 PHF1O43189 567 aaPredicted RBP9.54□□□□□ -0.88
SLIRP-212ENST00000613856 ORC5O43913 435 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 RBBP9O75884 186 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 ECDO95905 644 aaPredicted RBP9.54□□□□□ -0.88
SLIRP-212ENST00000613856 CSN2P05814 226 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 CSF1P09603 554 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 GSTT2BP0CG30 244 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 PPIAL4FP0DN26 164 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 NAT1P18440 290 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 PRDX2P32119 198 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 CDKN1AP38936 164 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 INPP1P49441 399 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 EFNA4P52798 201 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 DEFA1P59665 94 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 DEFA3P59666 94 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 AP3S2P59780 193 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 ASAH1Q13510 395 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 DYRK1AQ13627 763 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 KLF9Q13886 244 aaPredicted RBP9.54□□□□□ -0.88
SLIRP-212ENST00000613856 PDCD1Q15116 288 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 RNASE12Q5GAN4 147 aaKnown RBP9.54□□□□□ -0.88
SLIRP-212ENST00000613856 ATPAF1Q5TC12 328 aaPredicted RBP9.54□□□□□ -0.88
SLIRP-212ENST00000613856 GAPTQ8N292 157 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 CD177Q8N6Q3 437 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 BOLLQ8N9W6 283 aaKnown RBP9.54□□□□□ -0.88
SLIRP-212ENST00000613856 CCL17Q92583 94 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 SDSLQ96GA7 329 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 CYYR1Q96J86 154 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 CMSS1Q9BQ75 279 aaKnown RBP9.54□□□□□ -0.88
SLIRP-212ENST00000613856 RIMS4Q9H426 269 aaPredicted RBP9.54□□□□□ -0.88
SLIRP-212ENST00000613856 C12orf4Q9NQ89 552 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 KLK11Q9UBX7 282 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 TBC1D24Q9ULP9 559 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 PPIAL4AQ9Y536 164 aa9.54□□□□□ -0.88
SLIRP-212ENST00000613856 IGHV3OR15-7A0A075B7D8 119 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 NKX6-3A6NJ46 265 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 PSPNO60542 156 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 ZNF737O75373 536 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 NAPSAO96009 420 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 F12P00748 615 aaPredicted RBP9.53□□□□□ -0.88
SLIRP-212ENST00000613856 FCGR3AP08637 254 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 DAOP14920 347 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 TBPP20226 339 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 OR3A1P47881 315 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 CEBPDP49716 269 aaPredicted RBP9.53□□□□□ -0.88
SLIRP-212ENST00000613856 BTG1P62324 171 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 MRPS15P82914 257 aaKnown RBP9.53□□□□□ -0.88
SLIRP-212ENST00000613856 COL10A1Q03692 680 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 KCNJ8Q15842 424 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 SRSF7Q16629 238 aaKnown RBP eCLIP9.53□□□□□ -0.88
SLIRP-212ENST00000613856 FAM201AQ5SY85 155 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 ZNF788Q6ZQV5 615 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 Q6ZS49 121 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 HOGA1Q86XE5 327 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 TOMM5Q8N4H5 51 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 ZNF561Q8N587 486 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 TMEM229BQ8NBD8 167 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 PPP1R35Q8TAP8 253 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 SNX22Q96L94 193 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 C7orf50Q9BRJ6 194 aaKnown RBP9.53□□□□□ -0.88
SLIRP-212ENST00000613856 CHODLQ9H9P2 273 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 MYOZ1Q9NP98 299 aaPredicted RBP9.53□□□□□ -0.88
SLIRP-212ENST00000613856 IFT46Q9NQC8 304 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 ETAA1Q9NY74 926 aa9.53□□□□□ -0.88
SLIRP-212ENST00000613856 YLPM1P49750 1951 aaKnown RBP9.53□□□□□ -0.88
SLIRP-212ENST00000613856 TMEM82A0PJX8 343 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 UBE2QL1A1L167 161 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 TNFRSF13BO14836 293 aaPredicted RBP9.52□□□□□ -0.89
SLIRP-212ENST00000613856 SIGLEC5O15389 551 aa9.52□□□□□ -0.89
SLIRP-212ENST00000613856 NDUFA2O43678 99 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms