RNA–Protein interactions for RNA: ENST00000613670.4

LIG1-221, Transcript of DNA ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LIG1, Length 3,949 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-221ENST00000613670 ZNF808Q8N4W9 903 aaPredicted RBP10.94□□□□□ -0.66
LIG1-221ENST00000613670 OR4F5Q8NH21 305 aa10.94□□□□□ -0.66
LIG1-221ENST00000613670 OR4F4Q96R69 305 aa10.94□□□□□ -0.66
LIG1-221ENST00000613670 CACNG5Q9UF02 275 aa10.94□□□□□ -0.66
LIG1-221ENST00000613670 A0A087X0M5 115 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 A0A0J9YW62 118 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 A0A0U1RQV5 110 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 UBE2L5PA0A1B0GUS4 154 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 A0A1B0GX30 115 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 A0A1W2PNV4 684 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 SCTP09683 121 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 CFPP27918 469 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 KIAA2026Q5HYC2 2103 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 NCR3LG1Q68D85 454 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 ZNF66Q6ZN08 573 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 C5orf24Q7Z6I8 188 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 KMT5CQ86Y97 462 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 CCDC54Q8NEL0 328 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 ZNF665Q9H7R5 613 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 TRDCB7Z8K6 153 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 E9PLN8 166 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 SIRPB1O00241 398 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 CD63P08962 238 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 NPBWR2P48146 333 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 ERVS71-1P61550 626 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 ZNF92Q03936 586 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 HINT2Q9BX68 163 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 FBLN5Q9UBX5 448 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 IGSF23A1L1A6 192 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 CXorf65A6NEN9 183 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 OR6C6A6NF89 314 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 UBE2CO00762 179 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 YKT6O15498 198 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 VDAC1P21796 283 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 CXCL12P48061 93 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 DSCR4P56555 118 aaPredicted RBP10.93□□□□□ -0.66
LIG1-221ENST00000613670 LPAL2Q16609 132 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 PHYHD1Q5SRE7 291 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 SPATA46Q5T0L3 261 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 OR1K1Q8NGR3 316 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 SLC39A7Q92504 469 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 MARS2Q96GW9 593 aaKnown RBP10.93□□□□□ -0.66
LIG1-221ENST00000613670 UCK1Q9HA47 277 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 KIAA1456Q9P272 454 aa10.93□□□□□ -0.66
LIG1-221ENST00000613670 CDS2O95674 445 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 OR8U8P0C7N1 319 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 RAC2P15153 192 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 CLDN15P56746 228 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 ZXDAP98168 799 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 POM121Q96HA1 1249 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 PACRGQ96M98 296 aaPredicted RBP10.92□□□□□ -0.66
LIG1-221ENST00000613670 KCNIP1Q9NZI2 227 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 SOX15O60248 233 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 IL2RGP31785 369 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 PSMB3P49720 205 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 FAM185AQ8N0U4 392 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 SLC25A45Q8N413 288 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 OCIAD1Q9NX40 245 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 ZNF407Q9C0G0 2248 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 DEGS1O15121 323 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 NDUFS6O75380 124 aaKnown RBP10.92□□□□□ -0.66
LIG1-221ENST00000613670 BCL3P20749 454 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 CFHR1Q03591 330 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 ENDOGQ14249 297 aaKnown RBP10.92□□□□□ -0.66
LIG1-221ENST00000613670 FAM131CQ96AQ9 280 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 ZNF488Q96MN9 340 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 OPA3Q9H6K4 179 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 GPR27Q9NS67 375 aa10.92□□□□□ -0.66
LIG1-221ENST00000613670 CBR3O75828 277 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 KRASP01116 189 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 SERPINA7P05543 415 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 PGA5P0DJD9 388 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 HNF1AP20823 631 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 APLNRP35414 380 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 CDX1P47902 265 aaPredicted RBP10.91□□□□□ -0.66
LIG1-221ENST00000613670 H3F3AP84243 136 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 LYSMD4Q5XG99 296 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 FAM89BQ8N5H3 189 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 AGBL5Q8NDL9 886 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 BOD1Q96IK1 185 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 GINS3Q9BRX5 216 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 C12orf49Q9H741 205 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 SLC25A22Q9H936 323 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 PMS2P1A4D2B8 440 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 MAP1LC3B2A6NCE7 125 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 NPIPB13A6NJU9 1138 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 OR5H1A6NKK0 313 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 FAM166BA8MTA8 275 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 NPIPB4C9JG80 1138 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 GDF9O60383 454 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 PRDX4Q13162 271 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 WDR25Q64LD2 544 aaPredicted RBP10.91□□□□□ -0.66
LIG1-221ENST00000613670 C1orf147Q96MC9 270 aaPredicted RBP10.91□□□□□ -0.66
LIG1-221ENST00000613670 DUSP23Q9BVJ7 150 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 MAP1LC3BQ9GZQ8 125 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 FAM234AQ9H0X4 552 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 ZNF576Q9H609 170 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 TUBD1Q9UJT1 453 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 CLEC18AA5D8T8 446 aa10.91□□□□□ -0.66
LIG1-221ENST00000613670 FOSL2P15408 326 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms