RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 ZNF587BE7ETH6 402 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 MRPL33O75394 65 aaKnown RBP12.63□□□□□ -0.39
CDH1-213ENST00000612417 HEXAP06865 529 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 GLP1RP43220 463 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 ZNF124Q15973 351 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 SP6Q3SY56 376 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 GPR157Q5UAW9 335 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 TMEM88Q6PEY1 159 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 LGI3Q8N145 548 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 CCDC71LQ8N9Z2 235 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 GLYATL2Q8WU03 294 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 PIGCQ92535 297 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 ADAT1Q9BUB4 502 aaKnown RBP12.63□□□□□ -0.39
CDH1-213ENST00000612417 SCNM1Q9BWG6 230 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 ZDHHC11Q9H8X9 412 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 PLSCR2Q9NRY7 297 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 SPRR3Q9UBC9 169 aa12.63□□□□□ -0.39
CDH1-213ENST00000612417 RNASEK-C17orf49H0YIS7 233 aa12.62□□□□□ -0.39
CDH1-213ENST00000612417 H7C2Y5 167 aa12.62□□□□□ -0.39
CDH1-213ENST00000612417 FBXO24O75426 580 aa12.62□□□□□ -0.39
CDH1-213ENST00000612417 CEACAM4O75871 244 aa12.62□□□□□ -0.39
CDH1-213ENST00000612417 DUSP1P28562 367 aa12.62□□□□□ -0.39
CDH1-213ENST00000612417 FXYD4P59646 89 aa12.62□□□□□ -0.39
CDH1-213ENST00000612417 IL13RA2Q14627 380 aa12.62□□□□□ -0.39
CDH1-213ENST00000612417 SRSF7Q16629 238 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDH1-213ENST00000612417 BRICD5Q6PL45 260 aa12.62□□□□□ -0.39
CDH1-213ENST00000612417 LYZL2Q7Z4W2 148 aa12.62□□□□□ -0.39
CDH1-213ENST00000612417 CALHM1Q8IU99 346 aa12.62□□□□□ -0.39
CDH1-213ENST00000612417 MCEMP1Q8IX19 187 aa12.62□□□□□ -0.39
CDH1-213ENST00000612417 TUSC5Q8IXB3 177 aa12.62□□□□□ -0.39
CDH1-213ENST00000612417 ZADH2Q8N4Q0 377 aa12.62□□□□□ -0.39
CDH1-213ENST00000612417 ZNF611Q8N823 705 aa12.62□□□□□ -0.39
CDH1-213ENST00000612417 CPEB3Q8NE35 698 aaKnown RBP12.62□□□□□ -0.39
CDH1-213ENST00000612417 FAM96BQ9Y3D0 163 aa12.62□□□□□ -0.39
CDH1-213ENST00000612417 ACACAQ13085 2346 aa12.62□□□□□ -0.39
CDH1-213ENST00000612417 FAM221AA4D161 298 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 FAM157AC9JC47 383 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 SCGB1D2O95969 90 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 IGHV3-9P01782 118 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 NPBWR1P48145 328 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 PHLDA2Q53GA4 152 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 TSPO2Q5TGU0 170 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 CBLN2Q8IUK8 224 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 WNT2BQ93097 391 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 ERGIC1Q969X5 290 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 FAM212BQ9NTI7 297 aaPredicted RBP12.61□□□□□ -0.39
CDH1-213ENST00000612417 TINAGQ9UJW2 476 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 TMED3Q9Y3Q3 217 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 APC2O95996 2303 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 PQLC2LA1A4F0 135 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 RPL36A-HNRNPH2H7BZ11 118 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 GPR137BO60478 399 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 ZNF205O95201 554 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 SEC11BP0C7V7 166 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 PVALBP20472 110 aaPredicted RBP12.61□□□□□ -0.39
CDH1-213ENST00000612417 P2RY1P47900 373 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 DVL1P1P54792 670 aaPredicted RBP12.61□□□□□ -0.39
CDH1-213ENST00000612417 HERV-K104P61576 105 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 ANKRD39Q53RE8 183 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 Q6ZRG5 221 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 STX12Q86Y82 276 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 SAXO1Q8IYX7 474 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 FAM185AQ8N0U4 392 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 OR5L1Q8NGL2 311 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 WDYHV1Q96HA8 205 aa12.61□□□□□ -0.39
CDH1-213ENST00000612417 REPIN1Q9BWE0 567 aaKnown RBP12.61□□□□□ -0.39
CDH1-213ENST00000612417 MGAQ8IWI9 3026 aa12.6□□□□□ -0.39
CDH1-213ENST00000612417 PPYP01298 95 aa12.6□□□□□ -0.39
CDH1-213ENST00000612417 SFTA3P0C7M3 94 aa12.6□□□□□ -0.39
CDH1-213ENST00000612417 COX5BP10606 129 aa12.6□□□□□ -0.39
CDH1-213ENST00000612417 AADACP22760 399 aa12.6□□□□□ -0.39
CDH1-213ENST00000612417 SRPXP78539 464 aa12.6□□□□□ -0.39
CDH1-213ENST00000612417 SLC25A26Q70HW3 274 aa12.6□□□□□ -0.39
CDH1-213ENST00000612417 COMMD1Q8N668 190 aa12.6□□□□□ -0.39
CDH1-213ENST00000612417 GINS3Q9BRX5 216 aa12.6□□□□□ -0.39
CDH1-213ENST00000612417 ZNF442Q9H7R0 627 aa12.6□□□□□ -0.39
CDH1-213ENST00000612417 SVILO95425 2214 aa12.6□□□□□ -0.39
CDH1-213ENST00000612417 BORCS7-ASMTA0A0B4J1R7 106 aa12.6□□□□□ -0.39
CDH1-213ENST00000612417 OR7C1O76099 320 aaPredicted RBP12.6□□□□□ -0.39
CDH1-213ENST00000612417 F12P00748 615 aaPredicted RBP12.6□□□□□ -0.39
CDH1-213ENST00000612417 GLAP06280 429 aa12.6□□□□□ -0.39
CDH1-213ENST00000612417 UCP2P55851 309 aa12.6□□□□□ -0.39
CDH1-213ENST00000612417 RNPS1Q15287 305 aaKnown RBP12.6□□□□□ -0.39
CDH1-213ENST00000612417 NAXEQ8NCW5 288 aa12.6□□□□□ -0.39
CDH1-213ENST00000612417 SMIM3Q9BZL3 60 aa12.6□□□□□ -0.39
CDH1-213ENST00000612417 ST8SIA3O43173 380 aa12.59□□□□□ -0.39
CDH1-213ENST00000612417 DIRAS3O95661 229 aa12.59□□□□□ -0.39
CDH1-213ENST00000612417 DANCRP0C864 163 aa12.59□□□□□ -0.39
CDH1-213ENST00000612417 SPP1P10451 314 aa12.59□□□□□ -0.39
CDH1-213ENST00000612417 SFTPCP11686 197 aa12.59□□□□□ -0.39
CDH1-213ENST00000612417 NPBWR2P48146 333 aa12.59□□□□□ -0.39
CDH1-213ENST00000612417 SWI5Q1ZZU3 235 aa12.59□□□□□ -0.39
CDH1-213ENST00000612417 FBXW12Q6X9E4 464 aa12.59□□□□□ -0.39
CDH1-213ENST00000612417 BEND4Q6ZU67 534 aa12.59□□□□□ -0.39
CDH1-213ENST00000612417 OR52M1Q8NGK5 317 aa12.59□□□□□ -0.39
CDH1-213ENST00000612417 OR4D5Q8NGN0 318 aa12.59□□□□□ -0.39
CDH1-213ENST00000612417 OR11L1Q8NGX0 322 aa12.59□□□□□ -0.39
CDH1-213ENST00000612417 SLC7A10Q9NS82 523 aa12.59□□□□□ -0.39
CDH1-213ENST00000612417 ZDHHC8Q9ULC8 765 aa12.59□□□□□ -0.39
CDH1-213ENST00000612417 CEP295Q9C0D2 2601 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms