RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 FAM185AQ8N0U4 392 aa23.87■■□□□ 1.41
CSPG5-205ENST00000610462 SCCPDHQ8NBX0 429 aa23.87■■□□□ 1.41
CSPG5-205ENST00000610462 GLYATL2Q8WU03 294 aa23.87■■□□□ 1.41
CSPG5-205ENST00000610462 MSI2Q96DH6 328 aaKnown RBP23.87■■□□□ 1.41
CSPG5-205ENST00000610462 LINC00052Q96N35 136 aa23.87■■□□□ 1.41
CSPG5-205ENST00000610462 BET1O15155 118 aa23.87■■□□□ 1.41
CSPG5-205ENST00000610462 AGFG2O95081 481 aa23.87■■□□□ 1.41
CSPG5-205ENST00000610462 PSG7Q13046 419 aa23.87■■□□□ 1.41
CSPG5-205ENST00000610462 HERPUD1Q15011 391 aa23.87■■□□□ 1.41
CSPG5-205ENST00000610462 ALKBH6Q3KRA9 238 aa23.87■■□□□ 1.41
CSPG5-205ENST00000610462 HSD17B13Q7Z5P4 300 aaPredicted RBP23.87■■□□□ 1.41
CSPG5-205ENST00000610462 Q8IYB0 196 aa23.87■■□□□ 1.41
CSPG5-205ENST00000610462 LGI3Q8N145 548 aa23.87■■□□□ 1.41
CSPG5-205ENST00000610462 RDH5Q92781 318 aa23.87■■□□□ 1.41
CSPG5-205ENST00000610462 POLDIP2Q9Y2S7 368 aa23.87■■□□□ 1.41
CSPG5-205ENST00000610462 SPEF1Q9Y4P9 236 aa23.87■■□□□ 1.41
CSPG5-205ENST00000610462 H7C1Q1 480 aa23.86■■□□□ 1.41
CSPG5-205ENST00000610462 GALNT11Q8NCW6 608 aa23.86■■□□□ 1.41
CSPG5-205ENST00000610462 C3orf80F5H4A9 247 aa23.85■■□□□ 1.41
CSPG5-205ENST00000610462 FGF2P09038 288 aa23.85■■□□□ 1.41
CSPG5-205ENST00000610462 KCNJ3P48549 501 aa23.85■■□□□ 1.41
CSPG5-205ENST00000610462 Q6P435 159 aa23.85■■□□□ 1.41
CSPG5-205ENST00000610462 ZNF880Q6PDB4 577 aa23.85■■□□□ 1.41
CSPG5-205ENST00000610462 FOXRED2Q8IWF2 684 aa23.85■■□□□ 1.41
CSPG5-205ENST00000610462 A8MXK9 166 aa23.85■■□□□ 1.41
CSPG5-205ENST00000610462 DEGS1O15121 323 aa23.85■■□□□ 1.41
CSPG5-205ENST00000610462 MPPED1O15442 326 aa23.85■■□□□ 1.41
CSPG5-205ENST00000610462 PHF1O43189 567 aaPredicted RBP23.85■■□□□ 1.41
CSPG5-205ENST00000610462 TUSC2O75896 110 aa23.85■■□□□ 1.41
CSPG5-205ENST00000610462 GNRHRP30968 328 aa23.85■■□□□ 1.41
CSPG5-205ENST00000610462 SMCO1Q147U7 214 aa23.85■■□□□ 1.41
CSPG5-205ENST00000610462 LYZL2Q7Z4W2 148 aa23.85■■□□□ 1.41
CSPG5-205ENST00000610462 BAP18Q8IXM2 172 aa23.85■■□□□ 1.41
CSPG5-205ENST00000610462 EIF4E3Q8N5X7 224 aaKnown RBP23.85■■□□□ 1.41
CSPG5-205ENST00000610462 PRRX2Q99811 253 aa23.85■■□□□ 1.41
CSPG5-205ENST00000610462 SLC5A7Q9GZV3 580 aa23.85■■□□□ 1.41
CSPG5-205ENST00000610462 FBXO9Q9UK97 447 aaPredicted RBP23.85■■□□□ 1.41
CSPG5-205ENST00000610462 WDR1O75083 606 aa23.84■■□□□ 1.41
CSPG5-205ENST00000610462 DEDDO75618 318 aa23.84■■□□□ 1.41
CSPG5-205ENST00000610462 TNFSF13O75888 250 aa23.84■■□□□ 1.41
CSPG5-205ENST00000610462 ERVK11-1P61568 191 aa23.84■■□□□ 1.41
CSPG5-205ENST00000610462 C20orf204Q6ZNR8 217 aa23.84■■□□□ 1.41
CSPG5-205ENST00000610462 KLF14Q8TD94 323 aaPredicted RBP23.84■■□□□ 1.41
CSPG5-205ENST00000610462 PROCRQ9UNN8 238 aa23.84■■□□□ 1.41
CSPG5-205ENST00000610462 DMXL1Q9Y485 3027 aa23.84■■□□□ 1.41
CSPG5-205ENST00000610462 IGKV1-6A0A0C4DH72 117 aa23.83■■□□□ 1.41
CSPG5-205ENST00000610462 ZNF44P15621 663 aa23.83■■□□□ 1.41
CSPG5-205ENST00000610462 MPV17P39210 176 aa23.83■■□□□ 1.41
CSPG5-205ENST00000610462 EIF2S3P41091 472 aaKnown RBP23.83■■□□□ 1.41
CSPG5-205ENST00000610462 RND3P61587 244 aa23.83■■□□□ 1.41
CSPG5-205ENST00000610462 CXorf67Q86X51 503 aaPredicted RBP23.83■■□□□ 1.41
CSPG5-205ENST00000610462 LDLRAD3Q86YD5 345 aa23.83■■□□□ 1.41
CSPG5-205ENST00000610462 ZNF565Q8N9K5 539 aa23.83■■□□□ 1.41
CSPG5-205ENST00000610462 SREK1IP1Q8N9Q2 155 aaPredicted RBP23.83■■□□□ 1.41
CSPG5-205ENST00000610462 ZNF610Q8N9Z0 462 aa23.83■■□□□ 1.41
CSPG5-205ENST00000610462 BVESQ8NE79 360 aa23.83■■□□□ 1.41
CSPG5-205ENST00000610462 BARX1Q9HBU1 254 aaPredicted RBP23.83■■□□□ 1.41
CSPG5-205ENST00000610462 C3orf85A0A1B0GTC6 90 aa23.83■■□□□ 1.41
CSPG5-205ENST00000610462 TEX46H3BTG2 121 aa23.83■■□□□ 1.41
CSPG5-205ENST00000610462 HKR1P10072 659 aa23.83■■□□□ 1.41
CSPG5-205ENST00000610462 GLI4P10075 376 aa23.83■■□□□ 1.41
CSPG5-205ENST00000610462 STARD4Q96DR4 205 aa23.83■■□□□ 1.41
CSPG5-205ENST00000610462 TP53RKQ96S44 253 aa23.83■■□□□ 1.41
CSPG5-205ENST00000610462 COQ3Q9NZJ6 369 aa23.83■■□□□ 1.41
CSPG5-205ENST00000610462 MBD3L4A6NDZ8 208 aaPredicted RBP23.82■■□□□ 1.4
CSPG5-205ENST00000610462 MBD3L3A6NE82 208 aaPredicted RBP23.82■■□□□ 1.4
CSPG5-205ENST00000610462 MBD3L5A6NJ08 208 aaPredicted RBP23.82■■□□□ 1.4
CSPG5-205ENST00000610462 CGAP01215 116 aa23.82■■□□□ 1.4
CSPG5-205ENST00000610462 ZNF154Q13106 437 aa23.82■■□□□ 1.4
CSPG5-205ENST00000610462 OR8G1Q15617 311 aa23.82■■□□□ 1.4
CSPG5-205ENST00000610462 MBD3L2Q8NHZ7 208 aaPredicted RBP23.82■■□□□ 1.4
CSPG5-205ENST00000610462 SECTM1Q8WVN6 248 aa23.82■■□□□ 1.4
CSPG5-205ENST00000610462 ZNF292O60281 2723 aa23.82■■□□□ 1.4
CSPG5-205ENST00000610462 LOC105371267A0A1B0GV96 52 aa23.82■■□□□ 1.4
CSPG5-205ENST00000610462 TMEM210A6NLX4 147 aa23.82■■□□□ 1.4
CSPG5-205ENST00000610462 PGA5P0DJD9 388 aa23.82■■□□□ 1.4
CSPG5-205ENST00000610462 Q6ZS92 163 aa23.82■■□□□ 1.4
CSPG5-205ENST00000610462 LHFPL5Q8TAF8 219 aa23.82■■□□□ 1.4
CSPG5-205ENST00000610462 NRIP2Q9BQI9 281 aa23.82■■□□□ 1.4
CSPG5-205ENST00000610462 DNTTIP1Q9H147 329 aa23.82■■□□□ 1.4
CSPG5-205ENST00000610462 OPN3Q9H1Y3 402 aaPredicted RBP23.82■■□□□ 1.4
CSPG5-205ENST00000610462 ZNF71Q9NQZ8 489 aaPredicted RBP23.82■■□□□ 1.4
CSPG5-205ENST00000610462 LSM5Q9Y4Y9 91 aaKnown RBP23.82■■□□□ 1.4
CSPG5-205ENST00000610462 LOC400499M0QZD8 3231 aa23.81■■□□□ 1.4
CSPG5-205ENST00000610462 KRBOX1C9JBD0 128 aa23.81■■□□□ 1.4
CSPG5-205ENST00000610462 GPR31O00270 319 aa23.81■■□□□ 1.4
CSPG5-205ENST00000610462 MDH2P40926 338 aaKnown RBP23.81■■□□□ 1.4
CSPG5-205ENST00000610462 OR4A4PQ8NGN8 299 aa23.81■■□□□ 1.4
CSPG5-205ENST00000610462 OBP2BQ9NPH6 170 aa23.81■■□□□ 1.4
CSPG5-205ENST00000610462 PCDHB10Q9UN67 800 aa23.81■■□□□ 1.4
CSPG5-205ENST00000610462 GTF3C1Q12789 2109 aa23.81■■□□□ 1.4
CSPG5-205ENST00000610462 H0YL77 283 aa23.8■■□□□ 1.4
CSPG5-205ENST00000610462 CDIPTO14735 213 aa23.8■■□□□ 1.4
CSPG5-205ENST00000610462 TAAR5O14804 337 aa23.8■■□□□ 1.4
CSPG5-205ENST00000610462 SRPXP78539 464 aa23.8■■□□□ 1.4
CSPG5-205ENST00000610462 HLA-DRB3P79483 266 aa23.8■■□□□ 1.4
CSPG5-205ENST00000610462 PCSK4Q6UW60 755 aa23.8■■□□□ 1.4
CSPG5-205ENST00000610462 SEM1Q6ZVN7 128 aa23.8■■□□□ 1.4
CSPG5-205ENST00000610462 TMEM100Q9NV29 134 aa23.8■■□□□ 1.4
CSPG5-205ENST00000610462 IGKV1D-13A0A0B4J2D9 117 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms