RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 MEIKINA0A087WXM9 373 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 TRBV5-7A0A0A0MS05 114 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 IGHV2-26A0A0B4J1V2 119 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 CLPSL1A2RUU4 121 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 GTF2F2P13984 249 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 CDK2P24941 298 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 GLP1RP43220 463 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 RBM11P57052 281 aaKnown RBP10.88□□□□□ -0.67
SENP3-209ENST00000610454 SLC35A2P78381 396 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 FAM189A2Q15884 450 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 LY6EQ16553 131 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 PRAMEF5Q5TYX0 476 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 OLFML2AQ68BL7 652 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 ZNF626Q68DY1 528 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 AWAT2Q6E213 333 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 ASCL4Q6XD76 172 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 OR11H6Q8NGC7 330 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 NEK7Q8TDX7 302 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 C17orf50Q8WW18 174 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 CORO2AQ92828 525 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 UFD1Q92890 307 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 MUL1Q969V5 352 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 MALSU1Q96EH3 234 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 CNBD2Q96M20 576 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 TMED9Q9BVK6 235 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 SLITRK2Q9H156 845 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 MEGF9Q9H1U4 602 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 TCF7L1Q9HCS4 588 aa10.88□□□□□ -0.67
SENP3-209ENST00000610454 MEGF11A6BM72 1044 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 MAGEA13PA6NCF6 341 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 ZNF729A6NN14 1252 aaPredicted RBP10.87□□□□□ -0.67
SENP3-209ENST00000610454 ODF3BA8MYP8 253 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 H3BUI4 141 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 ATP6V1G2O95670 118 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 HSMCR30P0CW71 290 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 ARHGDIBP52566 201 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 SSX2Q16385 188 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 MPV17LQ2QL34 196 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 ACSM3Q53FZ2 586 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 PLA1AQ53H76 456 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 NHLRC3Q5JS37 347 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 ATAD3CQ5T2N8 411 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 MINOS1Q5TGZ0 78 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 HEPN1Q6WQI6 88 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 LHFPL4Q7Z7J7 247 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 RTN4RL2Q86UN3 420 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 CDH26Q8IXH8 852 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 Q8NFD4 153 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 ZNF596Q8TC21 504 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 COQ2Q96H96 371 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 OR5M11Q96RB7 305 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 PPIL3Q9H2H8 161 aaKnown RBP10.87□□□□□ -0.67
SENP3-209ENST00000610454 KIF25Q9UIL4 384 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 RNF114Q9Y508 228 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 MINOS1-NBL1R4GNA1 71 aa10.87□□□□□ -0.67
SENP3-209ENST00000610454 TRAV24A0A0B4J272 114 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 F2RL2O00254 374 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 TOR1AO14656 332 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 GEMIN2O14893 280 aaKnown RBP10.86□□□□□ -0.67
SENP3-209ENST00000610454 NFYBP25208 207 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 PAX6P26367 422 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 HTR1DP28221 377 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 VHLP40337 213 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 RELBQ01201 579 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 GPR50Q13585 617 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 RBM48Q5RL73 367 aaKnown RBP10.86□□□□□ -0.67
SENP3-209ENST00000610454 BRICD5Q6PL45 260 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 GLIPR1L1Q6UWM5 242 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 LIAT1Q6ZQX7 453 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 ABHD12Q8N2K0 398 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 DTX3Q8N9I9 347 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 SUMF2Q8NBJ7 301 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 OR4C13Q8NGP0 309 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 MRPS24Q96EL2 167 aaKnown RBP10.86□□□□□ -0.67
SENP3-209ENST00000610454 DPCDQ9BVM2 203 aaPredicted RBP10.86□□□□□ -0.67
SENP3-209ENST00000610454 Q9H521 79 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 DUSP21Q9H596 190 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 IFT22Q9H7X7 185 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 SPACA1Q9HBV2 294 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 PITPNC1Q9UKF7 332 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 RAB26Q9ULW5 256 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 HILPDAQ9Y5L2 63 aa10.86□□□□□ -0.67
SENP3-209ENST00000610454 KBTBD11-OT1A0A1B0GTJ5 212 aa10.85□□□□□ -0.67
SENP3-209ENST00000610454 FAM172BPA6NC97 362 aa10.85□□□□□ -0.67
SENP3-209ENST00000610454 FAM90A8PA6NJQ4 464 aa10.85□□□□□ -0.67
SENP3-209ENST00000610454 VGLL3A8MV65 326 aa10.85□□□□□ -0.67
SENP3-209ENST00000610454 CRHBPP24387 322 aa10.85□□□□□ -0.67
SENP3-209ENST00000610454 CEACAM3P40198 252 aa10.85□□□□□ -0.67
SENP3-209ENST00000610454 PRRX1P54821 245 aa10.85□□□□□ -0.67
SENP3-209ENST00000610454 TRAM1Q15629 374 aa10.85□□□□□ -0.67
SENP3-209ENST00000610454 HSD17B12Q53GQ0 312 aa10.85□□□□□ -0.67
SENP3-209ENST00000610454 LIPKQ5VXJ0 399 aa10.85□□□□□ -0.67
SENP3-209ENST00000610454 GLT8D1Q68CQ7 371 aa10.85□□□□□ -0.67
SENP3-209ENST00000610454 PRSS48Q7RTY5 328 aa10.85□□□□□ -0.67
SENP3-209ENST00000610454 WFDC12Q8WWY7 111 aa10.85□□□□□ -0.67
SENP3-209ENST00000610454 SGCDQ92629 289 aa10.85□□□□□ -0.67
SENP3-209ENST00000610454 CREB3L1Q96BA8 519 aa10.85□□□□□ -0.67
SENP3-209ENST00000610454 UQCC2Q9BRT2 126 aa10.85□□□□□ -0.67
SENP3-209ENST00000610454 NCOR1P1Q9H4R4 102 aa10.85□□□□□ -0.67
SENP3-209ENST00000610454 CALYQ9NYX4 217 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms