RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 GCGP01275 180 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 TYMSP04818 313 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 ARG1P05089 322 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 DUX4L2P0CJ85 424 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 DUX4L3P0CJ86 424 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 DUX4L5P0CJ88 424 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 DUX4L6P0CJ89 424 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 DUX4L7P0CJ90 424 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 AKR1C4P17516 323 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 GABRG2P18507 467 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 EIF1P41567 113 aaKnown RBP2.53□□□□□ -2
SMCHD1-213ENST00000609587 RPL5P46777 297 aaKnown RBP2.53□□□□□ -2
SMCHD1-213ENST00000609587 SRP9P49458 86 aaKnown RBP2.53□□□□□ -2
SMCHD1-213ENST00000609587 CDKN2DP55273 166 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 DLX6P56179 175 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 SNAP25P60880 206 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 CDC42P60953 191 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 RAB8AP61006 207 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 IL5RAQ01344 420 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 RPL18AQ02543 176 aaKnown RBP2.53□□□□□ -2
SMCHD1-213ENST00000609587 SKP2Q13309 424 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 IHHQ14623 411 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 FAM78AQ5JUQ0 283 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 UBE2UQ5VVX9 321 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 EPGNQ6UW88 154 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 LRRC18Q8N456 261 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 ATP6V1C2Q8NEY4 427 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 C16orf78Q8WTQ4 265 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 LRRC29Q8WV35 223 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 C11orf40Q8WZ69 217 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 YIPF5Q969M3 257 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 RERGQ96A58 199 aaPredicted RBP2.53□□□□□ -2
SMCHD1-213ENST00000609587 TESCQ96BS2 214 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 ZNF382Q96SR6 550 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 GABRG3Q99928 467 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 C2orf88Q9BSF0 95 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 UGT2B28Q9BY64 529 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 DSN1Q9H410 356 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 PRORYQ9H606 182 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 DUX4Q9UBX2 424 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 SLC7A11Q9UPY5 501 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 OR51B2Q9Y5P1 312 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 TMEM14AQ9Y6G1 99 aa2.53□□□□□ -2
SMCHD1-213ENST00000609587 RIMS1Q86UR5 1692 aaKnown RBP2.53□□□□□ -2
SMCHD1-213ENST00000609587 GPATCH8Q9UKJ3 1502 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 NCOA1Q15788 1441 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 MROH7Q68CQ1 1323 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 TMEM223A0PJW6 202 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 LRCOL1A6NCL2 159 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 A6NDN8 102 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 OR6C6A6NF89 314 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 CLDN24A6NM45 220 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 ZNF705GA8MUZ8 300 aaPredicted RBP2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 H7C2Y5 167 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 DFFAO00273 331 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 UBDO15205 165 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 PFDN6O15212 129 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 TCAPO15273 167 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 SSNA1O43805 119 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 UGT2B11O75310 529 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 CNIH1O95406 144 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 GPR75O95800 540 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 RLN2P04090 185 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 EIF4EP06730 217 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 CRYGDP07320 174 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 ADRA2AP08913 450 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 TCN2P20062 427 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 RAB3AP20336 220 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 GZMHP20718 246 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 RPS12P25398 132 aaKnown RBP2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 IFNGR2P38484 337 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 RAB7AP51149 207 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 FABP6P51161 128 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 P2RX1P51575 399 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 PAFAH1B2P68402 229 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 LOXL1Q08397 574 aaPredicted RBP2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 ST3GAL4Q11206 333 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 HIST3H3Q16695 136 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 LRRC75BQ2VPJ9 315 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 ABCA11PQ4W5N1 156 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 TMEM97Q5BJF2 176 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 FAM27D1Q5T7N8 215 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 NTM-AS1Q6ZSK4 140 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 OLIG3Q7RTU3 272 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 GLT6D1Q7Z4J2 308 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 HORMAD1Q86X24 394 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 BBS7Q8IWZ6 715 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 UBALD2Q8IYN6 164 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 GAPTQ8N292 157 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 OR2M7Q8NG81 312 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 OR10AD1Q8NGE0 317 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 OR4C13Q8NGP0 309 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 OR10K1Q8NGX5 313 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 OR10A6Q8NH74 314 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 COQ8AQ8NI60 647 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 C15orf40Q8WUR7 153 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 TIMM17AQ99595 171 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 PDCD1LG2Q9BQ51 273 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 TXNIPQ9H3M7 391 aa2.52□□□□□ -2.01
SMCHD1-213ENST00000609587 GLTPQ9NZD2 209 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms