RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 SLAMF9Q96A28 289 aa9.56□□□□□ -0.88
LINC00539-204ENST00000608957 SEH1LQ96EE3 360 aa9.56□□□□□ -0.88
LINC00539-204ENST00000608957 MRPS24Q96EL2 167 aaKnown RBP9.56□□□□□ -0.88
LINC00539-204ENST00000608957 Q96M66 194 aa9.56□□□□□ -0.88
LINC00539-204ENST00000608957 ZNF48Q96MX3 618 aaPredicted RBP9.56□□□□□ -0.88
LINC00539-204ENST00000608957 OR8B2Q96RD0 313 aa9.56□□□□□ -0.88
LINC00539-204ENST00000608957 AUNIPQ9H7T9 357 aa9.56□□□□□ -0.88
LINC00539-204ENST00000608957 DUX4Q9UBX2 424 aa9.56□□□□□ -0.88
LINC00539-204ENST00000608957 ZNF69Q9UC07 566 aa9.56□□□□□ -0.88
LINC00539-204ENST00000608957 POLDIP2Q9Y2S7 368 aa9.56□□□□□ -0.88
LINC00539-204ENST00000608957 AUP1Q9Y679 476 aa9.56□□□□□ -0.88
LINC00539-204ENST00000608957 IGHV3OR16-10A0A075B7F0 116 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 A6NLC8 198 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 VGLL3A8MV65 326 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 GABARAPH6UMI1 98 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 GYPAP02724 150 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 SFTPBP07988 381 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 IGHV4-38-2P0DP08 117 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 BCL3P20749 454 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 DEFA1P59665 94 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 DEFA3P59666 94 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 DGCR2P98153 550 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 RGS21Q2M5E4 152 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 ELP2Q6IA86 826 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 WDR82Q6UXN9 313 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 OSR2Q8N2R0 312 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 FAM89BQ8N5H3 189 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 TEX29Q8N6K0 151 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 SCCPDHQ8NBX0 429 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 CHST4Q8NCG5 386 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 Q8NFD4 153 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 OR10R2Q8NGX6 335 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 ZNF418Q8TF45 676 aaPredicted RBP9.55□□□□□ -0.88
LINC00539-204ENST00000608957 AQP3Q92482 292 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 GCDHQ92947 438 aaPredicted RBP9.55□□□□□ -0.88
LINC00539-204ENST00000608957 TLNRD1Q9H1K6 362 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 NUP50Q9UKX7 468 aa9.55□□□□□ -0.88
LINC00539-204ENST00000608957 KIR2DS1A0A191URI9 304 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 hCG_1807616A0A1W2PRN6 198 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 TMEM235A6NFC5 223 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 OOEPA6NGQ2 149 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 FOXI3A8MTJ6 420 aaPredicted RBP9.54□□□□□ -0.88
LINC00539-204ENST00000608957 SOCS1O15524 211 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 AKR7A2O43488 359 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 GSTP1P09211 210 aaKnown RBP9.54□□□□□ -0.88
LINC00539-204ENST00000608957 CD3GP09693 182 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 PTHLHP12272 177 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 HIST1H1DP16402 221 aaKnown RBP9.54□□□□□ -0.88
LINC00539-204ENST00000608957 AMY2BP19961 511 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 NPBWR2P48146 333 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 INPP1P49441 399 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 RBM11P57052 281 aaKnown RBP9.54□□□□□ -0.88
LINC00539-204ENST00000608957 FGF12P61328 243 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 SCN1BQ07699 218 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 PIGYQ3MUY2 71 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 ZNF260Q3ZCT1 412 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 HACD4Q5VWC8 232 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 TEX36Q5VZQ5 186 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 Q6ZTK2 550 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 BATF2Q8N1L9 274 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 SIGLECL1Q8N7X8 197 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 OR52I2Q8NH67 350 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 SETD6Q8TBK2 473 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 LRRC29Q8WV35 223 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 RAB3CQ96E17 227 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 THAP7Q9BT49 309 aaPredicted RBP9.54□□□□□ -0.88
LINC00539-204ENST00000608957 SUCNR1Q9BXA5 334 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 SCPEP1Q9HB40 452 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 RHOFQ9HBH0 211 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 RBFOX1Q9NWB1 397 aaKnown RBP9.54□□□□□ -0.88
LINC00539-204ENST00000608957 MTCH1Q9NZJ7 389 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 CLN8Q9UBY8 286 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 DSCAML1Q8TD84 2053 aa9.54□□□□□ -0.88
LINC00539-204ENST00000608957 SULT1C2O00338 296 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 MFNGO00587 321 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 CDIPTO14735 213 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 ADAM20O43506 726 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 LANCL1O43813 399 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 RHBDL1O75783 438 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 TFF1P04155 84 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 PGA5P0DJD9 388 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 GABRR1P24046 479 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 PRSS3P35030 304 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 UBA52P62987 128 aaKnown RBP9.53□□□□□ -0.88
LINC00539-204ENST00000608957 SCGB2A2Q13296 93 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 TAF9Q16594 264 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 NHLRC3Q5JS37 347 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 PLAC9Q5JTB6 97 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 ZNF57Q68EA5 555 aaPredicted RBP9.53□□□□□ -0.88
LINC00539-204ENST00000608957 NLRC3Q7RTR2 1065 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 Q8IYB0 196 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 BPIFB2Q8N4F0 458 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 POC5Q8NA72 575 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 FCAMRQ8WWV6 532 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 EMG1Q92979 244 aaKnown RBP9.53□□□□□ -0.88
LINC00539-204ENST00000608957 UPRTQ96BW1 309 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 ZNF488Q96MN9 340 aa9.53□□□□□ -0.88
LINC00539-204ENST00000608957 ZMAT3Q9HA38 289 aaKnown RBP9.53□□□□□ -0.88
LINC00539-204ENST00000608957 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.53□□□□□ -0.88
LINC00539-204ENST00000608957 TBC1D24Q9ULP9 559 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms