RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 MTNR1BP49286 362 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 KRTAP10-11P60412 298 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 GALEQ14376 348 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 DEFB121Q5J5C9 76 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 LHFPL3Q86UP9 236 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 SERPINA12Q8IW75 414 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 OSR2Q8N2R0 312 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 ZNF565Q8N9K5 539 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 OR51T1Q8NGJ9 327 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 OR13A1Q8NGR1 328 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 PYDC1Q8WXC3 89 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 LEAP2Q969E1 77 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 TOMM40LQ969M1 308 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 RPEQ96AT9 228 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 LGALS12Q96DT0 336 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 MRPL48Q96GC5 212 aaKnown RBP10.45□□□□□ -0.74
RPS28-204ENST00000602140 ALG8Q9BVK2 526 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 ISG20L2Q9H9L3 353 aaKnown RBP10.45□□□□□ -0.74
RPS28-204ENST00000602140 PCDHB16Q9NRJ7 776 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 FAM53CQ9NYF3 392 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 CALYQ9NYX4 217 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 KIF25Q9UIL4 384 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 MOB4Q9Y3A3 225 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 AMMECR1Q9Y4X0 333 aaPredicted RBP10.45□□□□□ -0.74
RPS28-204ENST00000602140 HSPE1-MOB4S4R3N1 261 aa10.45□□□□□ -0.74
RPS28-204ENST00000602140 MEIKINA0A087WXM9 373 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 TRAV24A0A0B4J272 114 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 WI2-2373I1.2A0A1W2PRP0 233 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 PSMB11A5LHX3 300 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 FAM90A18PA6NE21 464 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 FAM90A16PA6NEW6 464 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 FAM90A20PA6NIJ5 464 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 SNTNA6NMZ2 147 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 FAM90A9PA6NNJ1 464 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 FAM90A12PA8MX19 464 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 FAM90A5PA8MXJ8 464 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 J3QR06 171 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 ZFPL1O95159 310 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 SNRNP70P08621 437 aaKnown RBP10.44□□□□□ -0.74
RPS28-204ENST00000602140 FAM90A15PP0C7V4 464 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 FAM90A13PP0C7W8 464 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 FAM90A14PP0C7W9 464 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 FAM90A24PP0C7X0 464 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 C21orf33P30042 268 aaPredicted RBP10.44□□□□□ -0.74
RPS28-204ENST00000602140 PAN3Q58A45 887 aaKnown RBP10.44□□□□□ -0.74
RPS28-204ENST00000602140 ZNF691Q5VV52 312 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 LPCAT4Q643R3 524 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 ZNF329Q86UD4 541 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 THNSL2Q86YJ6 484 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 PARP16Q8N5Y8 322 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 LINC00482Q8N8I6 264 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 OR56B4Q8NH76 319 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 PDCD1LG2Q9BQ51 273 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 IDI2-AS1Q9NZ38 188 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 COL7A1Q02388 2944 aa10.44□□□□□ -0.74
RPS28-204ENST00000602140 TMEM212A6NML5 194 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 E9PI62 339 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 E9PQ18 207 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 IL1AP01583 271 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 RPSAP08865 295 aaKnown RBP10.43□□□□□ -0.74
RPS28-204ENST00000602140 HOXD3P31249 432 aaPredicted RBP10.43□□□□□ -0.74
RPS28-204ENST00000602140 GNG10P50151 68 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 DIAPH2-AS1Q14236 149 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 HES1Q14469 280 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 HNF4GQ14541 408 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 ZSCAN26Q16670 478 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 LTC4SQ16873 150 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 VAX1Q5SQQ9 334 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 ELP2Q6IA86 826 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 SYS1Q8N2H4 156 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 DRAM1Q8N682 238 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 PXT1Q8NFP0 134 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 OR5AK2Q8NH90 309 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 RFESDQ8TAC1 157 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 CNIH3Q8TBE1 160 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 MRGPRDQ8TDS7 321 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 TSEN15Q8WW01 171 aaKnown RBP10.43□□□□□ -0.74
RPS28-204ENST00000602140 NOL4LQ96MY1 436 aaPredicted RBP10.43□□□□□ -0.74
RPS28-204ENST00000602140 MYCBPQ99417 103 aaPredicted RBP10.43□□□□□ -0.74
RPS28-204ENST00000602140 ZNF649Q9BS31 505 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 BARHL1Q9BZE3 327 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 DHDHQ9UQ10 334 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 PSG11Q9UQ72 335 aa10.43□□□□□ -0.74
RPS28-204ENST00000602140 A0A1W2PPI3 338 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 GABRPO00591 440 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 TMEM11P17152 192 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 GABRB1P18505 474 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 ALDH3A2P51648 485 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 EGFEM1PQ0D2K5 195 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 MADCAM1Q13477 382 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 PIGYQ3MUY2 71 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 RSBN1Q5VWQ0 802 aaPredicted RBP10.42□□□□□ -0.74
RPS28-204ENST00000602140 C11orf87Q6NUJ2 197 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 ETV3LQ6ZN32 361 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 SATL1Q86VE3 508 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 MRPL41Q8IXM3 137 aaKnown RBP10.42□□□□□ -0.74
RPS28-204ENST00000602140 C5orf56Q8N8D9 126 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 OR51D1Q8NGF3 324 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 OR10K1Q8NGX5 313 aa10.42□□□□□ -0.74
RPS28-204ENST00000602140 PLPPR1Q8TBJ4 325 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms