RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 OR13A1Q8NGR1 328 aa14.26□□□□□ -0.13
CHMP2A-208ENST00000601220 ISG20L2Q9H9L3 353 aaKnown RBP14.26□□□□□ -0.13
CHMP2A-208ENST00000601220 IMPAD1Q9NX62 359 aa14.26□□□□□ -0.13
CHMP2A-208ENST00000601220 OR6C3Q9NZP0 311 aa14.26□□□□□ -0.13
CHMP2A-208ENST00000601220 PCDHGB5Q9Y5G0 923 aa14.26□□□□□ -0.13
CHMP2A-208ENST00000601220 NPIPB11E5RHQ5 1161 aa14.25□□□□□ -0.13
CHMP2A-208ENST00000601220 E9PI62 339 aa14.25□□□□□ -0.13
CHMP2A-208ENST00000601220 J3QR06 171 aa14.25□□□□□ -0.13
CHMP2A-208ENST00000601220 ZFPL1O95159 310 aa14.25□□□□□ -0.13
CHMP2A-208ENST00000601220 DUS4LO95620 317 aaKnown RBP14.25□□□□□ -0.13
CHMP2A-208ENST00000601220 OCM2P0CE71 109 aa14.25□□□□□ -0.13
CHMP2A-208ENST00000601220 OCMP0CE72 109 aaPredicted RBP14.25□□□□□ -0.13
CHMP2A-208ENST00000601220 FAM106CPP0CH98 169 aa14.25□□□□□ -0.13
CHMP2A-208ENST00000601220 MNDAP41218 407 aa14.25□□□□□ -0.13
CHMP2A-208ENST00000601220 RBM39Q14498 530 aaKnown RBP14.25□□□□□ -0.13
CHMP2A-208ENST00000601220 ZNF529Q6P280 563 aa14.25□□□□□ -0.13
CHMP2A-208ENST00000601220 MRPL41Q8IXM3 137 aaKnown RBP14.25□□□□□ -0.13
CHMP2A-208ENST00000601220 Q8NFD4 153 aa14.25□□□□□ -0.13
CHMP2A-208ENST00000601220 NEK6Q9HC98 313 aa14.25□□□□□ -0.13
CHMP2A-208ENST00000601220 KIF25Q9UIL4 384 aa14.25□□□□□ -0.13
CHMP2A-208ENST00000601220 MOB4Q9Y3A3 225 aa14.25□□□□□ -0.13
CHMP2A-208ENST00000601220 HSPE1-MOB4S4R3N1 261 aa14.25□□□□□ -0.13
CHMP2A-208ENST00000601220 COL7A1Q02388 2944 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 A0A1W2PPI3 338 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 SULT1B1O43704 296 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 SNRNP70P08621 437 aaKnown RBP14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 TMEM225BP0DP42 221 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 DBTP11182 482 aaKnown RBP14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 NFYBP25208 207 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 MTNR1BP49286 362 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 RASSF2P50749 326 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 PAX5Q02548 391 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 GALEQ14376 348 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 C9orf152Q5JTZ5 239 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 ZNF691Q5VV52 312 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 ZNF329Q86UD4 541 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 LHFPL3Q86UP9 236 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 SERPINA12Q8IW75 414 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 SYS1Q8N2H4 156 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 PXT1Q8NFP0 134 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 OR5D14Q8NGL3 314 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 CNIH3Q8TBE1 160 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 LEAP2Q969E1 77 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 CALYQ9NYX4 217 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 PSG11Q9UQ72 335 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 KIAA2026Q5HYC2 2103 aa14.24□□□□□ -0.13
CHMP2A-208ENST00000601220 PSMB11A5LHX3 300 aa14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 H0YJX3 145 aa14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 EI24O14681 340 aa14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 ATP5HO75947 161 aa14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 IGHV3-7P01780 117 aa14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 HOXD3P31249 432 aaPredicted RBP14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 ZIK1Q3SY52 487 aaPredicted RBP14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 RSBN1Q5VWQ0 802 aaPredicted RBP14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 C11orf87Q6NUJ2 197 aa14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 ASCL4Q6XD76 172 aa14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 C18orf65Q6ZTR6 163 aa14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 DRAM1Q8N682 238 aa14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 C5orf56Q8N8D9 126 aa14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 ZNF565Q8N9K5 539 aa14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 OR56B4Q8NH76 319 aa14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 PLPPR1Q8TBJ4 325 aa14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 RPEQ96AT9 228 aa14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 ALG8Q9BVK2 526 aa14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 PCDHB16Q9NRJ7 776 aa14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 IDI2-AS1Q9NZ38 188 aa14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 RYR3Q15413 4870 aa14.23□□□□□ -0.13
CHMP2A-208ENST00000601220 MEIKINA0A087WXM9 373 aa14.22□□□□□ -0.13
CHMP2A-208ENST00000601220 H3BNX3 289 aa14.22□□□□□ -0.13
CHMP2A-208ENST00000601220 HSPB6O14558 160 aa14.22□□□□□ -0.13
CHMP2A-208ENST00000601220 IL1AP01583 271 aa14.22□□□□□ -0.13
CHMP2A-208ENST00000601220 HCKP08631 526 aa14.22□□□□□ -0.13
CHMP2A-208ENST00000601220 GLP1RP43220 463 aa14.22□□□□□ -0.13
CHMP2A-208ENST00000601220 THBS3P49746 956 aa14.22□□□□□ -0.13
CHMP2A-208ENST00000601220 RPL23AP62750 156 aaKnown RBP14.22□□□□□ -0.13
CHMP2A-208ENST00000601220 PAN3Q58A45 887 aaKnown RBP14.22□□□□□ -0.13
CHMP2A-208ENST00000601220 KHDC1LQ5JSQ8 128 aa14.22□□□□□ -0.13
CHMP2A-208ENST00000601220 PYDC1Q8WXC3 89 aa14.22□□□□□ -0.13
CHMP2A-208ENST00000601220 TOMM40LQ969M1 308 aa14.22□□□□□ -0.13
CHMP2A-208ENST00000601220 NOL4LQ96MY1 436 aaPredicted RBP14.22□□□□□ -0.13
CHMP2A-208ENST00000601220 NR1H4Q96RI1 486 aaPredicted RBP14.22□□□□□ -0.13
CHMP2A-208ENST00000601220 PDCD1LG2Q9BQ51 273 aa14.22□□□□□ -0.13
CHMP2A-208ENST00000601220 ZNF581Q9P0T4 197 aa14.22□□□□□ -0.13
CHMP2A-208ENST00000601220 TMEM212A6NML5 194 aa14.21□□□□□ -0.13
CHMP2A-208ENST00000601220 GABRPO00591 440 aa14.21□□□□□ -0.13
CHMP2A-208ENST00000601220 C21orf33P30042 268 aaPredicted RBP14.21□□□□□ -0.13
CHMP2A-208ENST00000601220 IL13RA2Q14627 380 aa14.21□□□□□ -0.13
CHMP2A-208ENST00000601220 ZSCAN26Q16670 478 aa14.21□□□□□ -0.13
CHMP2A-208ENST00000601220 DEFB121Q5J5C9 76 aa14.21□□□□□ -0.13
CHMP2A-208ENST00000601220 OR2W3Q7Z3T1 314 aa14.21□□□□□ -0.13
CHMP2A-208ENST00000601220 OR51A2Q8NGJ7 313 aa14.21□□□□□ -0.13
CHMP2A-208ENST00000601220 RHOXF1Q8NHV9 184 aa14.21□□□□□ -0.13
CHMP2A-208ENST00000601220 RFESDQ8TAC1 157 aa14.21□□□□□ -0.13
CHMP2A-208ENST00000601220 RGP1Q92546 391 aaPredicted RBP14.21□□□□□ -0.13
CHMP2A-208ENST00000601220 BARHL1Q9BZE3 327 aa14.21□□□□□ -0.13
CHMP2A-208ENST00000601220 ERVK13-1Q9NX77 482 aa14.21□□□□□ -0.13
CHMP2A-208ENST00000601220 AMMECR1Q9Y4X0 333 aaPredicted RBP14.21□□□□□ -0.13
CHMP2A-208ENST00000601220 LINC01548A6NM66 108 aa14.2□□□□□ -0.14
CHMP2A-208ENST00000601220 DYNC1I1O14576 645 aa14.2□□□□□ -0.14
CHMP2A-208ENST00000601220 FGF16O43320 207 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms