RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 CCDC121Q6ZUS5 278 aa13.54□□□□□ -0.24
SCAF1-204ENST00000601038 CBR4Q8N4T8 237 aa13.54□□□□□ -0.24
SCAF1-204ENST00000601038 PXT1Q8NFP0 134 aa13.54□□□□□ -0.24
SCAF1-204ENST00000601038 OR4X2Q8NGF9 303 aa13.54□□□□□ -0.24
SCAF1-204ENST00000601038 OR9G1Q8NH87 305 aa13.54□□□□□ -0.24
SCAF1-204ENST00000601038 OR5AK2Q8NH90 309 aa13.54□□□□□ -0.24
SCAF1-204ENST00000601038 KIRREL1Q96J84 757 aa13.54□□□□□ -0.24
SCAF1-204ENST00000601038 ZNF649Q9BS31 505 aa13.54□□□□□ -0.24
SCAF1-204ENST00000601038 PPIL3Q9H2H8 161 aaKnown RBP13.54□□□□□ -0.24
SCAF1-204ENST00000601038 INPP5EQ9NRR6 644 aa13.54□□□□□ -0.24
SCAF1-204ENST00000601038 ZNF281Q9Y2X9 895 aa13.54□□□□□ -0.24
SCAF1-204ENST00000601038 H0YJX3 145 aa13.53□□□□□ -0.24
SCAF1-204ENST00000601038 MPZL2O60487 215 aa13.53□□□□□ -0.24
SCAF1-204ENST00000601038 CCDC159P0C7I6 412 aa13.53□□□□□ -0.24
SCAF1-204ENST00000601038 FAM106CPP0CH98 169 aa13.53□□□□□ -0.24
SCAF1-204ENST00000601038 IGLL1P15814 213 aa13.53□□□□□ -0.24
SCAF1-204ENST00000601038 NFYBP25208 207 aa13.53□□□□□ -0.24
SCAF1-204ENST00000601038 RBM39Q14498 530 aaKnown RBP13.53□□□□□ -0.24
SCAF1-204ENST00000601038 ZFP1Q6P2D0 407 aa13.53□□□□□ -0.24
SCAF1-204ENST00000601038 THNSL2Q86YJ6 484 aa13.53□□□□□ -0.24
SCAF1-204ENST00000601038 RHOXF1Q8NHV9 184 aa13.53□□□□□ -0.24
SCAF1-204ENST00000601038 MYDGFQ969H8 173 aa13.53□□□□□ -0.24
SCAF1-204ENST00000601038 CPNE2Q96FN4 548 aaPredicted RBP13.53□□□□□ -0.24
SCAF1-204ENST00000601038 Q96MT0 163 aa13.53□□□□□ -0.24
SCAF1-204ENST00000601038 PDCD1LG2Q9BQ51 273 aa13.53□□□□□ -0.24
SCAF1-204ENST00000601038 LINC00574Q9H8X3 128 aa13.53□□□□□ -0.24
SCAF1-204ENST00000601038 PCDHB16Q9NRJ7 776 aa13.53□□□□□ -0.24
SCAF1-204ENST00000601038 ERVK13-1Q9NX77 482 aa13.53□□□□□ -0.24
SCAF1-204ENST00000601038 DHDHQ9UQ10 334 aa13.53□□□□□ -0.24
SCAF1-204ENST00000601038 TRAV24A0A0B4J272 114 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 FAM90A18PA6NE21 464 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 FAM90A16PA6NEW6 464 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 FAM90A20PA6NIJ5 464 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 FAM90A9PA6NNJ1 464 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 FAM90A12PA8MX19 464 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 FAM90A5PA8MXJ8 464 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 E9PI62 339 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 PF4P02776 101 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 FAM90A15PP0C7V4 464 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 FAM90A13PP0C7W8 464 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 FAM90A14PP0C7W9 464 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 FAM90A24PP0C7X0 464 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 C21orf33P30042 268 aaPredicted RBP13.52□□□□□ -0.25
SCAF1-204ENST00000601038 RAB40BQ12829 278 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 PAN3Q58A45 887 aaKnown RBP13.52□□□□□ -0.25
SCAF1-204ENST00000601038 CNIH3Q8TBE1 160 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 HAVCR2Q8TDQ0 301 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 TSEN15Q8WW01 171 aaKnown RBP13.52□□□□□ -0.25
SCAF1-204ENST00000601038 RPEQ96AT9 228 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 NR1H4Q96RI1 486 aaPredicted RBP13.52□□□□□ -0.25
SCAF1-204ENST00000601038 BARHL1Q9BZE3 327 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 AMBNQ9NP70 447 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 KIF25Q9UIL4 384 aa13.52□□□□□ -0.25
SCAF1-204ENST00000601038 AMMECR1Q9Y4X0 333 aaPredicted RBP13.52□□□□□ -0.25
SCAF1-204ENST00000601038 MEIKINA0A087WXM9 373 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 SH2D7A6NKC9 451 aaPredicted RBP13.51□□□□□ -0.25
SCAF1-204ENST00000601038 J3QR06 171 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 HSPB6O14558 160 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 MAGEB3O15480 346 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 RAB3AP20336 220 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 GLP1RP43220 463 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 GBX2P52951 348 aaPredicted RBP13.51□□□□□ -0.25
SCAF1-204ENST00000601038 SLC35A2P78381 396 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 PAX5Q02548 391 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 IL13RA2Q14627 380 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 C9orf152Q5JTZ5 239 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 ZNF529Q6P280 563 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 C10orf99Q6UWK7 81 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 OSR2Q8N2R0 312 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 Q8NFD4 153 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 OR13A1Q8NGR1 328 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 TOMM40LQ969M1 308 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 MRPS18AQ9NVS2 196 aaKnown RBP13.51□□□□□ -0.25
SCAF1-204ENST00000601038 CALYQ9NYX4 217 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 MOB4Q9Y3A3 225 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 HSPE1-MOB4S4R3N1 261 aa13.51□□□□□ -0.25
SCAF1-204ENST00000601038 NPIPB11E5RHQ5 1161 aa13.5□□□□□ -0.25
SCAF1-204ENST00000601038 KCNJ3P48549 501 aa13.5□□□□□ -0.25
SCAF1-204ENST00000601038 ZSCAN26Q16670 478 aa13.5□□□□□ -0.25
SCAF1-204ENST00000601038 RSBN1Q5VWQ0 802 aaPredicted RBP13.5□□□□□ -0.25
SCAF1-204ENST00000601038 LPCAT4Q643R3 524 aa13.5□□□□□ -0.25
SCAF1-204ENST00000601038 ASCL4Q6XD76 172 aa13.5□□□□□ -0.25
SCAF1-204ENST00000601038 SATL1Q86VE3 508 aa13.5□□□□□ -0.25
SCAF1-204ENST00000601038 TNFAIP8L1Q8WVP5 186 aa13.5□□□□□ -0.25
SCAF1-204ENST00000601038 RCC1LQ96I51 464 aaKnown RBP13.5□□□□□ -0.25
SCAF1-204ENST00000601038 GPER1Q99527 375 aa13.5□□□□□ -0.25
SCAF1-204ENST00000601038 C9orf16Q9BUW7 83 aa13.5□□□□□ -0.25
SCAF1-204ENST00000601038 IDI2-AS1Q9NZ38 188 aa13.5□□□□□ -0.25
SCAF1-204ENST00000601038 PSG11Q9UQ72 335 aa13.5□□□□□ -0.25
SCAF1-204ENST00000601038 RPL36Q9Y3U8 105 aaKnown RBP13.5□□□□□ -0.25
SCAF1-204ENST00000601038 GABRPO00591 440 aa13.49□□□□□ -0.25
SCAF1-204ENST00000601038 DUS4LO95620 317 aaKnown RBP13.49□□□□□ -0.25
SCAF1-204ENST00000601038 CLIC3O95833 236 aa13.49□□□□□ -0.25
SCAF1-204ENST00000601038 IL1AP01583 271 aa13.49□□□□□ -0.25
SCAF1-204ENST00000601038 SNRNP70P08621 437 aaKnown RBP13.49□□□□□ -0.25
SCAF1-204ENST00000601038 MADCAM1Q13477 382 aa13.49□□□□□ -0.25
SCAF1-204ENST00000601038 RSU1Q15404 277 aa13.49□□□□□ -0.25
SCAF1-204ENST00000601038 KLHL22Q53GT1 634 aa13.49□□□□□ -0.25
SCAF1-204ENST00000601038 KHDC1LQ5JSQ8 128 aa13.49□□□□□ -0.25
SCAF1-204ENST00000601038 SLC16A12Q6ZSM3 486 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms