RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 PAN3Q58A45 887 aaKnown RBP12.67□□□□□ -0.38
VRK3-221ENST00000600284 ARSJQ5FYB0 599 aaPredicted RBP12.67□□□□□ -0.38
VRK3-221ENST00000600284 TTC23Q5W5X9 447 aa12.67□□□□□ -0.38
VRK3-221ENST00000600284 CCDC144NLQ6NUI1 221 aa12.67□□□□□ -0.38
VRK3-221ENST00000600284 BAIAP2L2Q6UXY1 529 aa12.67□□□□□ -0.38
VRK3-221ENST00000600284 SATL1Q86VE3 508 aa12.67□□□□□ -0.38
VRK3-221ENST00000600284 NDUFA11Q86Y39 141 aa12.67□□□□□ -0.38
VRK3-221ENST00000600284 OR51A2Q8NGJ7 313 aa12.67□□□□□ -0.38
VRK3-221ENST00000600284 RGP1Q92546 391 aaPredicted RBP12.67□□□□□ -0.38
VRK3-221ENST00000600284 TMEM106AQ96A25 262 aa12.67□□□□□ -0.38
VRK3-221ENST00000600284 LINC00574Q9H8X3 128 aa12.67□□□□□ -0.38
VRK3-221ENST00000600284 ZNF286AQ9HBT8 521 aa12.67□□□□□ -0.38
VRK3-221ENST00000600284 TMEM138Q9NPI0 162 aa12.67□□□□□ -0.38
VRK3-221ENST00000600284 TAS2R4Q9NYW5 299 aa12.67□□□□□ -0.38
VRK3-221ENST00000600284 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.67□□□□□ -0.38
VRK3-221ENST00000600284 DIMT1Q9UNQ2 313 aaKnown RBP12.67□□□□□ -0.38
VRK3-221ENST00000600284 EXOSC1Q9Y3B2 195 aaKnown RBP12.67□□□□□ -0.38
VRK3-221ENST00000600284 TRAV24A0A0B4J272 114 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 LY6LH3BQJ8 138 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 OGG1O15527 345 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 CD28P10747 220 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 GDNFP39905 211 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 VDAC2P45880 294 aaPredicted RBP12.66□□□□□ -0.38
VRK3-221ENST00000600284 SOX2P48431 317 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 MED21Q13503 144 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 NHLRC3Q5JS37 347 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 TPTE2P1Q5T6R2 138 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 OR10A7Q8NGE5 316 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 OR9G1Q8NH87 305 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 CAPSLQ8WWF8 208 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 SMIM19Q96E16 107 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 KIRREL1Q96J84 757 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 NR1H4Q96RI1 486 aaPredicted RBP12.66□□□□□ -0.38
VRK3-221ENST00000600284 OCSTAMPQ9BR26 566 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 PPIL3Q9H2H8 161 aaKnown RBP12.66□□□□□ -0.38
VRK3-221ENST00000600284 IFT22Q9H7X7 185 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 PCDHB16Q9NRJ7 776 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 PAK1IP1Q9NWT1 392 aaPredicted RBP12.66□□□□□ -0.38
VRK3-221ENST00000600284 ING3Q9NXR8 418 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 IL36GQ9NZH8 169 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 ZNF281Q9Y2X9 895 aa12.66□□□□□ -0.38
VRK3-221ENST00000600284 KIAA2026Q5HYC2 2103 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 MEIKINA0A087WXM9 373 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 OR2F2O95006 317 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 MYL12AP19105 171 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 MNDAP41218 407 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 PPP3R1P63098 170 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 OR2G6Q5TZ20 316 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 XAF1Q6GPH4 301 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 Q6ZS46 218 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 SLC16A12Q6ZSM3 486 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 PACRGLQ8N7B6 248 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 SETD9Q8NE22 299 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 OR4F17Q8NGA8 305 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 TMEM80Q96HE8 168 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 RBM14Q96PK6 669 aaKnown RBP12.65□□□□□ -0.38
VRK3-221ENST00000600284 OR4F4Q96R69 305 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 METTL9Q9H1A3 318 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 MMP28Q9H239 520 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 CHCHD3Q9NX63 227 aaKnown RBP12.65□□□□□ -0.38
VRK3-221ENST00000600284 CALYQ9NYX4 217 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 KIF25Q9UIL4 384 aa12.65□□□□□ -0.38
VRK3-221ENST00000600284 FAM172BPA6NC97 362 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 NPIPB11E5RHQ5 1161 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 M0QZK8 103 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 XPNPEP2O43895 674 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 ZNF780AO75290 641 aaPredicted RBP12.64□□□□□ -0.39
VRK3-221ENST00000600284 GPX5O75715 221 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 HTR3BO95264 441 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 IL1AP01583 271 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 BDKRB2P30411 391 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 ZNF93P35789 620 aaPredicted RBP12.64□□□□□ -0.39
VRK3-221ENST00000600284 NSUN5P1Q3KNT7 163 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 KPRPQ5T749 579 aaPredicted RBP12.64□□□□□ -0.39
VRK3-221ENST00000600284 SAMD5Q5TGI4 173 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 RSBN1Q5VWQ0 802 aaPredicted RBP12.64□□□□□ -0.39
VRK3-221ENST00000600284 LINC00596Q86U02 117 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 THNSL2Q86YJ6 484 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 C1QL4Q86Z23 238 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 OSR2Q8N2R0 312 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 OR13A1Q8NGR1 328 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 OR52N1Q8NH53 320 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 S100A13Q99584 98 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 SLC25A33Q9BSK2 321 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 FAM192AQ9GZU8 254 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 IDI2-AS1Q9NZ38 188 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 ST3GAL6Q9Y274 331 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 AMMECR1Q9Y4X0 333 aaPredicted RBP12.64□□□□□ -0.39
VRK3-221ENST00000600284 SIRT4Q9Y6E7 314 aaPredicted RBP12.64□□□□□ -0.39
VRK3-221ENST00000600284 HSPE1-MOB4S4R3N1 261 aa12.64□□□□□ -0.39
VRK3-221ENST00000600284 TRBV5-5A0A0J9YX44 114 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 J3QR06 171 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 HSPB6O14558 160 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 CSTBP04080 98 aaKnown RBP12.63□□□□□ -0.39
VRK3-221ENST00000600284 FAM106CPP0CH98 169 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 GZMHP20718 246 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 CD24P25063 80 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 NFYBP25208 207 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 GLP1RP43220 463 aa12.63□□□□□ -0.39
VRK3-221ENST00000600284 OR3A4PP47883 348 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms