RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 AMMECR1Q9Y4X0 333 aaPredicted RBP13.62□□□□□ -0.23
SMG9-210ENST00000600097 IGKV1-12A0A0C4DH73 117 aa13.61□□□□□ -0.23
SMG9-210ENST00000600097 APOL3O95236 402 aa13.61□□□□□ -0.23
SMG9-210ENST00000600097 IGKV1D-12P01611 117 aa13.61□□□□□ -0.23
SMG9-210ENST00000600097 SCN1BQ07699 218 aa13.61□□□□□ -0.23
SMG9-210ENST00000600097 COMMD1Q8N668 190 aa13.61□□□□□ -0.23
SMG9-210ENST00000600097 PACRGLQ8N7B6 248 aa13.61□□□□□ -0.23
SMG9-210ENST00000600097 RFKQ969G6 155 aa13.61□□□□□ -0.23
SMG9-210ENST00000600097 FGGYQ96C11 551 aa13.61□□□□□ -0.23
SMG9-210ENST00000600097 COQ2Q96H96 371 aa13.61□□□□□ -0.23
SMG9-210ENST00000600097 GMPPBQ9Y5P6 360 aa13.61□□□□□ -0.23
SMG9-210ENST00000600097 KIAA2026Q5HYC2 2103 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 KBTBD11-OT1A0A1B0GTJ5 212 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 NUDT19A8MXV4 375 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 FGF16O43320 207 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 MT-ND2P03891 347 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 ISG15P05161 165 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 SNRNP70P08621 437 aaKnown RBP13.6□□□□□ -0.23
SMG9-210ENST00000600097 CCDC159P0C7I6 412 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 NHLRC4P0CG21 123 aaPredicted RBP13.6□□□□□ -0.23
SMG9-210ENST00000600097 NFYBP25208 207 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 GP2P55259 537 aaKnown RBP13.6□□□□□ -0.23
SMG9-210ENST00000600097 SLC35B1P78383 322 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 DGCR2P98153 550 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 C17orf58Q2M2W7 97 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 TP53I3Q53FA7 332 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 MEDAGQ5VYS4 303 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 C8orf86Q6ZUL3 223 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 RNF144BQ7Z419 303 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 SAXO1Q8IYX7 474 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 ZNF565Q8N9K5 539 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 ZNF555Q8NEP9 628 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 OR2G2Q8NGZ5 317 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 RFT1Q96AA3 541 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 KIRREL1Q96J84 757 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 MBOAT4Q96T53 435 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 P2RX4Q99571 388 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 NEK6Q9HC98 313 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 ING3Q9NXR8 418 aa13.6□□□□□ -0.23
SMG9-210ENST00000600097 SMPD3Q9NY59 655 aaPredicted RBP13.6□□□□□ -0.23
SMG9-210ENST00000600097 SNTNA6NMZ2 147 aa13.59□□□□□ -0.23
SMG9-210ENST00000600097 SERPINE3A8MV23 424 aa13.59□□□□□ -0.23
SMG9-210ENST00000600097 H0YHG0 523 aa13.59□□□□□ -0.23
SMG9-210ENST00000600097 SLC33A1O00400 549 aaPredicted RBP13.59□□□□□ -0.23
SMG9-210ENST00000600097 MPZL2O60487 215 aa13.59□□□□□ -0.23
SMG9-210ENST00000600097 ZNF85Q03923 595 aa13.59□□□□□ -0.23
SMG9-210ENST00000600097 HES1Q14469 280 aa13.59□□□□□ -0.23
SMG9-210ENST00000600097 LRRC36Q1X8D7 754 aa13.59□□□□□ -0.23
SMG9-210ENST00000600097 LPCAT4Q643R3 524 aa13.59□□□□□ -0.23
SMG9-210ENST00000600097 Q6P435 159 aa13.59□□□□□ -0.23
SMG9-210ENST00000600097 KCTD20Q7Z5Y7 419 aa13.59□□□□□ -0.23
SMG9-210ENST00000600097 C5orf56Q8N8D9 126 aa13.59□□□□□ -0.23
SMG9-210ENST00000600097 KLHL30-AS1Q8NEE0 82 aa13.59□□□□□ -0.23
SMG9-210ENST00000600097 OR56B4Q8NH76 319 aa13.59□□□□□ -0.23
SMG9-210ENST00000600097 RNF166Q96A37 237 aaPredicted RBP13.59□□□□□ -0.23
SMG9-210ENST00000600097 VCXQ9H320 206 aa13.59□□□□□ -0.23
SMG9-210ENST00000600097 LOC100130705A0A1B0GUX0 176 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 J3QR06 171 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 DEGS1O15121 323 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 RAMP3O60896 148 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 CGB3P0DN86 165 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 CGB7P0DN87 165 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 TMEM11P17152 192 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 RAB7AP51149 207 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 SNRPGP62308 76 aaKnown RBP13.58□□□□□ -0.24
SMG9-210ENST00000600097 MADCAM1Q13477 382 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 ATXN7L3Q14CW9 347 aaPredicted RBP13.58□□□□□ -0.24
SMG9-210ENST00000600097 SLC25A30Q5SVS4 291 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 FDX2Q6P4F2 183 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 ZNF695Q8IW36 515 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 FOXRED2Q8IWF2 684 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 OR8H3Q8N146 312 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 DRAM1Q8N682 238 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 OR5D18Q8NGL1 313 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 HAVCR2Q8TDQ0 301 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 NOL4LQ96MY1 436 aaPredicted RBP13.58□□□□□ -0.24
SMG9-210ENST00000600097 SPACA5Q96QH8 159 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 NCOR1P1Q9H4R4 102 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 FAM118AQ9NWS6 357 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 FRRS1LQ9P0K9 344 aa13.58□□□□□ -0.24
SMG9-210ENST00000600097 A0A1W2PPI3 338 aa13.57□□□□□ -0.24
SMG9-210ENST00000600097 CASQ2O14958 399 aaPredicted RBP13.57□□□□□ -0.24
SMG9-210ENST00000600097 SLC16A6O15403 523 aa13.57□□□□□ -0.24
SMG9-210ENST00000600097 IGHG2P01859 326 aa13.57□□□□□ -0.24
SMG9-210ENST00000600097 DBTP11182 482 aaKnown RBP13.57□□□□□ -0.24
SMG9-210ENST00000600097 C21orf33P30042 268 aaPredicted RBP13.57□□□□□ -0.24
SMG9-210ENST00000600097 GLP1RP43220 463 aa13.57□□□□□ -0.24
SMG9-210ENST00000600097 CCR9P51686 369 aa13.57□□□□□ -0.24
SMG9-210ENST00000600097 UTF1Q5T230 341 aa13.57□□□□□ -0.24
SMG9-210ENST00000600097 SLC35E3Q7Z769 313 aa13.57□□□□□ -0.24
SMG9-210ENST00000600097 OR51T1Q8NGJ9 327 aa13.57□□□□□ -0.24
SMG9-210ENST00000600097 OR13C3Q8NGS6 347 aa13.57□□□□□ -0.24
SMG9-210ENST00000600097 OR13C9Q8NGT0 318 aa13.57□□□□□ -0.24
SMG9-210ENST00000600097 Q96MT0 163 aa13.57□□□□□ -0.24
SMG9-210ENST00000600097 PPIL3Q9H2H8 161 aaKnown RBP13.57□□□□□ -0.24
SMG9-210ENST00000600097 LINC00574Q9H8X3 128 aa13.57□□□□□ -0.24
SMG9-210ENST00000600097 CALYQ9NYX4 217 aa13.57□□□□□ -0.24
SMG9-210ENST00000600097 U3KQK5 164 aa13.57□□□□□ -0.24
SMG9-210ENST00000600097 CDK5R1Q15078 307 aa13.56□□□□□ -0.24
SMG9-210ENST00000600097 OGFRL1Q5TC84 451 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms