RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 DBTP11182 482 aaKnown RBP16.74■□□□□ 0.27
PNKP-212ENST00000599454 RAB7AP51149 207 aa16.74■□□□□ 0.27
PNKP-212ENST00000599454 BNIP1Q12981 228 aa16.74■□□□□ 0.27
PNKP-212ENST00000599454 C8orf86Q6ZUL3 223 aa16.74■□□□□ 0.27
PNKP-212ENST00000599454 OR8H3Q8N146 312 aa16.74■□□□□ 0.27
PNKP-212ENST00000599454 C5orf56Q8N8D9 126 aa16.74■□□□□ 0.27
PNKP-212ENST00000599454 OR51T1Q8NGJ9 327 aa16.74■□□□□ 0.27
PNKP-212ENST00000599454 OR13C9Q8NGT0 318 aa16.74■□□□□ 0.27
PNKP-212ENST00000599454 OR56B4Q8NH76 319 aa16.74■□□□□ 0.27
PNKP-212ENST00000599454 SLC7A6OSQ96CW6 309 aaPredicted RBP16.74■□□□□ 0.27
PNKP-212ENST00000599454 HRASLS5Q96KN8 279 aa16.74■□□□□ 0.27
PNKP-212ENST00000599454 P2RX4Q99571 388 aa16.74■□□□□ 0.27
PNKP-212ENST00000599454 ING3Q9NXR8 418 aa16.74■□□□□ 0.27
PNKP-212ENST00000599454 SERPINE3A8MV23 424 aa16.73■□□□□ 0.27
PNKP-212ENST00000599454 HTR1AP08908 422 aa16.73■□□□□ 0.27
PNKP-212ENST00000599454 NHLRC4P0CG21 123 aaPredicted RBP16.73■□□□□ 0.27
PNKP-212ENST00000599454 TMEM11P17152 192 aa16.73■□□□□ 0.27
PNKP-212ENST00000599454 MTNR1BP49286 362 aa16.73■□□□□ 0.27
PNKP-212ENST00000599454 DGCR2P98153 550 aa16.73■□□□□ 0.27
PNKP-212ENST00000599454 MADCAM1Q13477 382 aa16.73■□□□□ 0.27
PNKP-212ENST00000599454 HES1Q14469 280 aa16.73■□□□□ 0.27
PNKP-212ENST00000599454 DRAM1Q8N682 238 aa16.73■□□□□ 0.27
PNKP-212ENST00000599454 KLHL30-AS1Q8NEE0 82 aa16.73■□□□□ 0.27
PNKP-212ENST00000599454 OR13C3Q8NGS6 347 aa16.73■□□□□ 0.27
PNKP-212ENST00000599454 HAVCR2Q8TDQ0 301 aa16.73■□□□□ 0.27
PNKP-212ENST00000599454 SPACA5Q96QH8 159 aa16.73■□□□□ 0.27
PNKP-212ENST00000599454 PPIL3Q9H2H8 161 aaKnown RBP16.73■□□□□ 0.27
PNKP-212ENST00000599454 ZCCHC4Q9H5U6 513 aa16.73■□□□□ 0.27
PNKP-212ENST00000599454 LINC00574Q9H8X3 128 aa16.73■□□□□ 0.27
PNKP-212ENST00000599454 CALYQ9NYX4 217 aa16.73■□□□□ 0.27
PNKP-212ENST00000599454 A0A1W2PPI3 338 aa16.72■□□□□ 0.27
PNKP-212ENST00000599454 SLC16A6O15403 523 aa16.72■□□□□ 0.27
PNKP-212ENST00000599454 RAMP3O60896 148 aa16.72■□□□□ 0.27
PNKP-212ENST00000599454 RPSAP08865 295 aaKnown RBP16.72■□□□□ 0.27
PNKP-212ENST00000599454 FCGR1AP12314 374 aa16.72■□□□□ 0.27
PNKP-212ENST00000599454 C21orf33P30042 268 aaPredicted RBP16.72■□□□□ 0.27
PNKP-212ENST00000599454 POLR2IP36954 125 aaKnown RBP16.72■□□□□ 0.27
PNKP-212ENST00000599454 GLP1RP43220 463 aa16.72■□□□□ 0.27
PNKP-212ENST00000599454 NANOS3P60323 173 aaKnown RBP16.72■□□□□ 0.27
PNKP-212ENST00000599454 CDK5R1Q15078 307 aa16.72■□□□□ 0.27
PNKP-212ENST00000599454 UTF1Q5T230 341 aa16.72■□□□□ 0.27
PNKP-212ENST00000599454 SLC16A12Q6ZSM3 486 aa16.72■□□□□ 0.27
PNKP-212ENST00000599454 FOXRED2Q8IWF2 684 aa16.72■□□□□ 0.27
PNKP-212ENST00000599454 TRUB1Q8WWH5 349 aaKnown RBP16.72■□□□□ 0.27
PNKP-212ENST00000599454 NOL4LQ96MY1 436 aaPredicted RBP16.72■□□□□ 0.27
PNKP-212ENST00000599454 IDI2-AS1Q9NZ38 188 aa16.72■□□□□ 0.27
PNKP-212ENST00000599454 MYRFQ9Y2G1 1151 aa16.72■□□□□ 0.27
PNKP-212ENST00000599454 DAPL1A0PJW8 107 aa16.71■□□□□ 0.27
PNKP-212ENST00000599454 H0YHG0 523 aa16.71■□□□□ 0.27
PNKP-212ENST00000599454 IL1AP01583 271 aa16.71■□□□□ 0.27
PNKP-212ENST00000599454 IGHG2P01859 326 aa16.71■□□□□ 0.27
PNKP-212ENST00000599454 CCDC159P0C7I6 412 aa16.71■□□□□ 0.27
PNKP-212ENST00000599454 TMEM225BP0DP42 221 aa16.71■□□□□ 0.27
PNKP-212ENST00000599454 PAX5Q02548 391 aa16.71■□□□□ 0.27
PNKP-212ENST00000599454 RNF144BQ7Z419 303 aa16.71■□□□□ 0.27
PNKP-212ENST00000599454 SLC35E3Q7Z769 313 aa16.71■□□□□ 0.27
PNKP-212ENST00000599454 ZNF695Q8IW36 515 aa16.71■□□□□ 0.27
PNKP-212ENST00000599454 OR10A7Q8NGE5 316 aa16.71■□□□□ 0.27
PNKP-212ENST00000599454 OR51A4Q8NGJ6 313 aa16.71■□□□□ 0.27
PNKP-212ENST00000599454 OR10AC1Q8NH08 325 aa16.71■□□□□ 0.27
PNKP-212ENST00000599454 BARHL1Q9BZE3 327 aa16.71■□□□□ 0.27
PNKP-212ENST00000599454 RIBC2Q9H4K1 309 aa16.71■□□□□ 0.27
PNKP-212ENST00000599454 AP4S1Q9Y587 144 aa16.71■□□□□ 0.27
PNKP-212ENST00000599454 MEIKINA0A087WXM9 373 aa16.7■□□□□ 0.26
PNKP-212ENST00000599454 OR4C45A6NMZ5 311 aa16.7■□□□□ 0.26
PNKP-212ENST00000599454 H0YJX3 145 aa16.7■□□□□ 0.26
PNKP-212ENST00000599454 J3QRE1 110 aa16.7■□□□□ 0.26
PNKP-212ENST00000599454 HCKP08631 526 aa16.7■□□□□ 0.26
PNKP-212ENST00000599454 ZP1P60852 638 aa16.7■□□□□ 0.26
PNKP-212ENST00000599454 PAN3Q58A45 887 aaKnown RBP16.7■□□□□ 0.26
PNKP-212ENST00000599454 ELP2Q6IA86 826 aa16.7■□□□□ 0.26
PNKP-212ENST00000599454 C18orf65Q6ZTR6 163 aa16.7■□□□□ 0.26
PNKP-212ENST00000599454 AMIGO2Q86SJ2 522 aa16.7■□□□□ 0.26
PNKP-212ENST00000599454 OR13A1Q8NGR1 328 aa16.7■□□□□ 0.26
PNKP-212ENST00000599454 CPNE2Q96FN4 548 aaPredicted RBP16.7■□□□□ 0.26
PNKP-212ENST00000599454 MYCBPQ99417 103 aaPredicted RBP16.7■□□□□ 0.26
PNKP-212ENST00000599454 OSBPL10Q9BXB5 764 aa16.7■□□□□ 0.26
PNKP-212ENST00000599454 KIF25Q9UIL4 384 aa16.7■□□□□ 0.26
PNKP-212ENST00000599454 PSG11Q9UQ72 335 aa16.7■□□□□ 0.26
PNKP-212ENST00000599454 NPIPB11E5RHQ5 1161 aa16.69■□□□□ 0.26
PNKP-212ENST00000599454 IGKV1D-33P01593 117 aa16.69■□□□□ 0.26
PNKP-212ENST00000599454 IGKV1-33P01594 117 aa16.69■□□□□ 0.26
PNKP-212ENST00000599454 KCNJ3P48549 501 aa16.69■□□□□ 0.26
PNKP-212ENST00000599454 KISS1Q15726 138 aa16.69■□□□□ 0.26
PNKP-212ENST00000599454 TEX38Q6PEX7 206 aa16.69■□□□□ 0.26
PNKP-212ENST00000599454 STPG2Q8N412 459 aa16.69■□□□□ 0.26
PNKP-212ENST00000599454 OR5D14Q8NGL3 314 aa16.69■□□□□ 0.26
PNKP-212ENST00000599454 MRPL48Q96GC5 212 aaKnown RBP16.69■□□□□ 0.26
PNKP-212ENST00000599454 GON7Q9BXV9 100 aa16.69■□□□□ 0.26
PNKP-212ENST00000599454 IMPAD1Q9NX62 359 aa16.69■□□□□ 0.26
PNKP-212ENST00000599454 SORL1Q92673 2214 aa16.69■□□□□ 0.26
PNKP-212ENST00000599454 SULT1B1O43704 296 aa16.68■□□□□ 0.26
PNKP-212ENST00000599454 ALKBH1Q13686 389 aaKnown RBP16.68■□□□□ 0.26
PNKP-212ENST00000599454 IL13RA2Q14627 380 aa16.68■□□□□ 0.26
PNKP-212ENST00000599454 SLC25A30Q5SVS4 291 aa16.68■□□□□ 0.26
PNKP-212ENST00000599454 ZNF691Q5VV52 312 aa16.68■□□□□ 0.26
PNKP-212ENST00000599454 SERPINA12Q8IW75 414 aa16.68■□□□□ 0.26
PNKP-212ENST00000599454 ACBD7Q8N6N7 88 aa16.68■□□□□ 0.26
PNKP-212ENST00000599454 PXT1Q8NFP0 134 aa16.68■□□□□ 0.26
PNKP-212ENST00000599454 OR10X1Q8NGY0 326 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms