RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 GLIPR1P48060 266 aa13.52□□□□□ -0.25
PNKP-210ENST00000597965 MRPL41Q8IXM3 137 aaKnown RBP13.52□□□□□ -0.25
PNKP-210ENST00000597965 CYGBQ8WWM9 190 aa13.52□□□□□ -0.25
PNKP-210ENST00000597965 FGGYQ96C11 551 aa13.52□□□□□ -0.25
PNKP-210ENST00000597965 ADAT3Q96EY9 351 aaPredicted RBP13.52□□□□□ -0.25
PNKP-210ENST00000597965 CPNE2Q96FN4 548 aaPredicted RBP13.52□□□□□ -0.25
PNKP-210ENST00000597965 ZNF649Q9BS31 505 aa13.52□□□□□ -0.25
PNKP-210ENST00000597965 ZNF286AQ9HBT8 521 aa13.52□□□□□ -0.25
PNKP-210ENST00000597965 FAM118AQ9NWS6 357 aa13.52□□□□□ -0.25
PNKP-210ENST00000597965 DNAH3Q8TD57 4116 aa13.52□□□□□ -0.25
PNKP-210ENST00000597965 IGKV1-9A0A0C4DH69 117 aa13.51□□□□□ -0.25
PNKP-210ENST00000597965 LY6LH3BQJ8 138 aa13.51□□□□□ -0.25
PNKP-210ENST00000597965 DEGS1O15121 323 aa13.51□□□□□ -0.25
PNKP-210ENST00000597965 MITFO75030 526 aaPredicted RBP13.51□□□□□ -0.25
PNKP-210ENST00000597965 MT-ND2P03891 347 aa13.51□□□□□ -0.25
PNKP-210ENST00000597965 GNAO1P09471 354 aa13.51□□□□□ -0.25
PNKP-210ENST00000597965 EPHA2P29317 976 aa13.51□□□□□ -0.25
PNKP-210ENST00000597965 HOXD3P31249 432 aaPredicted RBP13.51□□□□□ -0.25
PNKP-210ENST00000597965 THBS3P49746 956 aa13.51□□□□□ -0.25
PNKP-210ENST00000597965 ISL1P61371 349 aa13.51□□□□□ -0.25
PNKP-210ENST00000597965 RPL23AP62750 156 aaKnown RBP13.51□□□□□ -0.25
PNKP-210ENST00000597965 SCN1BQ07699 218 aa13.51□□□□□ -0.25
PNKP-210ENST00000597965 C11orf87Q6NUJ2 197 aa13.51□□□□□ -0.25
PNKP-210ENST00000597965 RDH10Q8IZV5 341 aa13.51□□□□□ -0.25
PNKP-210ENST00000597965 OR2G2Q8NGZ5 317 aa13.51□□□□□ -0.25
PNKP-210ENST00000597965 TOMM40LQ969M1 308 aa13.51□□□□□ -0.25
PNKP-210ENST00000597965 MRPL48Q96GC5 212 aaKnown RBP13.51□□□□□ -0.25
PNKP-210ENST00000597965 HRASLS5Q96KN8 279 aa13.51□□□□□ -0.25
PNKP-210ENST00000597965 GON7Q9BXV9 100 aa13.51□□□□□ -0.25
PNKP-210ENST00000597965 BATF3Q9NR55 127 aa13.51□□□□□ -0.25
PNKP-210ENST00000597965 KBTBD11-OT1A0A1B0GTJ5 212 aa13.5□□□□□ -0.25
PNKP-210ENST00000597965 FAM172BPA6NC97 362 aa13.5□□□□□ -0.25
PNKP-210ENST00000597965 FGF16O43320 207 aa13.5□□□□□ -0.25
PNKP-210ENST00000597965 RAMP3O60896 148 aa13.5□□□□□ -0.25
PNKP-210ENST00000597965 NHLRC4P0CG21 123 aaPredicted RBP13.5□□□□□ -0.25
PNKP-210ENST00000597965 CALCBP10092 127 aa13.5□□□□□ -0.25
PNKP-210ENST00000597965 DBTP11182 482 aaKnown RBP13.5□□□□□ -0.25
PNKP-210ENST00000597965 NFYBP25208 207 aa13.5□□□□□ -0.25
PNKP-210ENST00000597965 C21orf33P30042 268 aaPredicted RBP13.5□□□□□ -0.25
PNKP-210ENST00000597965 MYCNOSP40205 109 aa13.5□□□□□ -0.25
PNKP-210ENST00000597965 RAB7AP51149 207 aa13.5□□□□□ -0.25
PNKP-210ENST00000597965 CCR9P51686 369 aa13.5□□□□□ -0.25
PNKP-210ENST00000597965 MADCAM1Q13477 382 aa13.5□□□□□ -0.25
PNKP-210ENST00000597965 TTC23Q5W5X9 447 aa13.5□□□□□ -0.25
PNKP-210ENST00000597965 FOXRED2Q8IWF2 684 aa13.5□□□□□ -0.25
PNKP-210ENST00000597965 HAVCR2Q8TDQ0 301 aa13.5□□□□□ -0.25
PNKP-210ENST00000597965 TRUB1Q8WWH5 349 aaKnown RBP13.5□□□□□ -0.25
PNKP-210ENST00000597965 BARHL1Q9BZE3 327 aa13.5□□□□□ -0.25
PNKP-210ENST00000597965 NCOR1P1Q9H4R4 102 aa13.5□□□□□ -0.25
PNKP-210ENST00000597965 SCOCQ9UIL1 159 aa13.5□□□□□ -0.25
PNKP-210ENST00000597965 COL7A1Q02388 2944 aa13.5□□□□□ -0.25
PNKP-210ENST00000597965 FAM90A18PA6NE21 464 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 FAM90A16PA6NEW6 464 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 FAM90A20PA6NIJ5 464 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 SNTNA6NMZ2 147 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 FAM90A9PA6NNJ1 464 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 SERPINE3A8MV23 424 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 FAM90A12PA8MX19 464 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 FAM90A5PA8MXJ8 464 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 NUDT19A8MXV4 375 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 SLC16A6O15403 523 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 FAM90A15PP0C7V4 464 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 FAM90A13PP0C7W8 464 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 FAM90A14PP0C7W9 464 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 FAM90A24PP0C7X0 464 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 TMEM11P17152 192 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 POLR2IP36954 125 aaKnown RBP13.49□□□□□ -0.25
PNKP-210ENST00000597965 KIR3DL2P43630 455 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 HES1Q14469 280 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 TP53I3Q53FA7 332 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 FDX2Q6P4F2 183 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 BAIAP2L2Q6UXY1 529 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 SLC16A12Q6ZSM3 486 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 OR8H3Q8N146 312 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 OR5D14Q8NGL3 314 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 OR13C3Q8NGS6 347 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 FRRS1LQ9P0K9 344 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 ORC6Q9Y5N6 252 aa13.49□□□□□ -0.25
PNKP-210ENST00000597965 TENM3Q9P273 2699 aa13.48□□□□□ -0.25
PNKP-210ENST00000597965 DAPL1A0PJW8 107 aa13.48□□□□□ -0.25
PNKP-210ENST00000597965 J3QR06 171 aa13.48□□□□□ -0.25
PNKP-210ENST00000597965 SLC33A1O00400 549 aaPredicted RBP13.48□□□□□ -0.25
PNKP-210ENST00000597965 APOL3O95236 402 aa13.48□□□□□ -0.25
PNKP-210ENST00000597965 HTR1AP08908 422 aa13.48□□□□□ -0.25
PNKP-210ENST00000597965 MTNR1BP49286 362 aa13.48□□□□□ -0.25
PNKP-210ENST00000597965 ATXN7L3Q14CW9 347 aaPredicted RBP13.48□□□□□ -0.25
PNKP-210ENST00000597965 C10orf99Q6UWK7 81 aa13.48□□□□□ -0.25
PNKP-210ENST00000597965 OR2W3Q7Z3T1 314 aa13.48□□□□□ -0.25
PNKP-210ENST00000597965 ZNF329Q86UD4 541 aa13.48□□□□□ -0.25
PNKP-210ENST00000597965 ZNF555Q8NEP9 628 aa13.48□□□□□ -0.25
PNKP-210ENST00000597965 OR10A7Q8NGE5 316 aa13.48□□□□□ -0.25
PNKP-210ENST00000597965 OR51T1Q8NGJ9 327 aa13.48□□□□□ -0.25
PNKP-210ENST00000597965 RFT1Q96AA3 541 aa13.48□□□□□ -0.25
PNKP-210ENST00000597965 KIRREL1Q96J84 757 aa13.48□□□□□ -0.25
PNKP-210ENST00000597965 GABARAPL3Q9BY60 117 aa13.48□□□□□ -0.25
PNKP-210ENST00000597965 ZCCHC4Q9H5U6 513 aa13.48□□□□□ -0.25
PNKP-210ENST00000597965 IMPAD1Q9NX62 359 aa13.48□□□□□ -0.25
PNKP-210ENST00000597965 IGKV1-12A0A0C4DH73 117 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 LOC100130705A0A1B0GUX0 176 aa13.47□□□□□ -0.25
PNKP-210ENST00000597965 A6NHS1 94 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms