RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776		E9PI62	339 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776		M0QZK8	103 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	EI24	O14681	340 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	SULT1B1	O43704	296 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	ALPL	P05186	524 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	SNRNP70	P08621	437 aa	Known RBP	8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	FAM106CP	P0CH98	169 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	CGB3	P0DN86	165 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	CGB7	P0DN87	165 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	SNRPG	P62308	76 aa	Known RBP	8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	DIAPH2-AS1	Q14236	149 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	KISS1	Q15726	138 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	PAN3	Q58A45	887 aa	Known RBP	8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	DEFB121	Q5J5C9	76 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	ZNF691	Q5VV52	312 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	CCDC144NL	Q6NUI1	221 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	C18orf65	Q6ZTR6	163 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	LHFPL3	Q86UP9	236 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	DRAM1	Q8N682	238 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	OR51T1	Q8NGJ9	327 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	OR13A1	Q8NGR1	328 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	OR9G1	Q8NH87	305 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	TRUB1	Q8WWH5	349 aa	Known RBP	8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	RPE	Q96AT9	228 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	CREB3L1	Q96BA8	519 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	LGALS12	Q96DT0	336 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	NOL4L	Q96MY1	436 aa	Predicted RBP	8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	ZNF649	Q9BS31	505 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	ALG8	Q9BVK2	526 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	RHOF	Q9HBH0	211 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	CALY	Q9NYX4	217 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	ZNF581	Q9P0T4	197 aa		8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	EXOG	Q9Y2C4	368 aa	Known RBP	8.35	□□□□□ -1.07
LSM4-205	ENST00000597776	TRAV39	A0A0B4J263	110 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776		A0A1W2PPI3	338 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	FAM90A18P	A6NE21	464 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	FAM90A16P	A6NEW6	464 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	FAM90A20P	A6NIJ5	464 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	FAM90A9P	A6NNJ1	464 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	FAM90A12P	A8MX19	464 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	FAM90A5P	A8MXJ8	464 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776		E9PQ18	207 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776		J3QR06	171 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	ZFPL1	O95159	310 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	CLIC3	O95833	236 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	FAM90A15P	P0C7V4	464 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	FAM90A13P	P0C7W8	464 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	FAM90A14P	P0C7W9	464 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	FAM90A24P	P0C7X0	464 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	DBT	P11182	482 aa	Known RBP	8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	MTNR1B	P49286	362 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	GNG10	P50151	68 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	RASSF2	P50749	326 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	HES1	Q14469	280 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	HNF4G	Q14541	408 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	PIGY	Q3MUY2	71 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	VAX1	Q5SQQ9	334 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	SLC25A30	Q5SVS4	291 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	MEDAG	Q5VYS4	303 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	SERPINA12	Q8IW75	414 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	MRPL41	Q8IXM3	137 aa	Known RBP	8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	C5orf56	Q8N8D9	126 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	OR51A2	Q8NGJ7	313 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	OR5D14	Q8NGL3	314 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	OR10K1	Q8NGX5	313 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	RFESD	Q8TAC1	157 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	PLPPR1	Q8TBJ4	325 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	MRGPRD	Q8TDS7	321 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	PDCD1LG2	Q9BQ51	273 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	FAM53C	Q9NYF3	392 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	IDI2-AS1	Q9NZ38	188 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	LINC00527	Q9UJ94	153 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	PSG11	Q9UQ72	335 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	8.34	□□□□□ -1.07
LSM4-205	ENST00000597776	ORC6	Q9Y5N6	252 aa		8.34	□□□□□ -1.07
LSM4-205	ENST00000597776		A0A1W2PPE3	182 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	GABRP	O00591	440 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	CIB2	O75838	187 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	DUS4L	O95620	317 aa	Known RBP	8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	IL1A	P01583	271 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	CCDC159	P0C7I6	412 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	TMEM11	P17152	192 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	SSTR5	P35346	364 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	RPL23A	P62750	156 aa	Known RBP	8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	EGFEM1P	Q0D2K5	195 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	MADCAM1	Q13477	382 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	GALE	Q14376	348 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	RSBN1	Q5VWQ0	802 aa	Predicted RBP	8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	C8orf86	Q6ZUL3	223 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	OR2W3	Q7Z3T1	314 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	SATL1	Q86VE3	508 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	PARP16	Q8N5Y8	322 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	ZNF565	Q8N9K5	539 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	CNIH3	Q8TBE1	160 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	TNFAIP8L1	Q8WVP5	186 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	TSEN15	Q8WW01	171 aa	Known RBP	8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	FAM192A	Q9GZU8	254 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	AMBN	Q9NP70	447 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	PCDHB16	Q9NRJ7	776 aa		8.33	□□□□□ -1.08
LSM4-205	ENST00000597776	DHDH	Q9UQ10	334 aa		8.33	□□□□□ -1.08

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