RNA–Protein interactions for RNA: ENST00000597476.5

RAB4B-204, Transcript of RAB4B, member RAS oncogene family, human

TSL 2

Gene RAB4B, Length 1,982 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB4B-204	ENST00000597476	FXYD4	P59646	89 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	ATXN7L3	Q14CW9	347 aa	Predicted RBP	12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	SLC9A3R2	Q15599	337 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	TMEM108	Q6UXF1	575 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	TMEM17	Q86X19	198 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	TGIF2LY	Q8IUE0	185 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	TMEM185A	Q8NFB2	350 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	OR5T2	Q8NGG2	359 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	ZFAND1	Q8TCF1	268 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	NEUROG1	Q92886	237 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	DECR2	Q9NUI1	292 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	MGAT4A	Q9UM21	535 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	SPEF1	Q9Y4P9	236 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	SLC22A5	O76082	557 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	HAND1	O96004	215 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	KNG1	P01042	644 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	ACAA1	P09110	424 aa	Predicted RBP	12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	PGAM2	P15259	253 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	AADAC	P22760	399 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	ERP29	P30040	261 aa	Known RBP	12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	CD200	P41217	278 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	PAN3	Q58A45	887 aa	Known RBP	12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	CLEC18B	Q6UXF7	455 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476		Q8IYB0	196 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	NUP37	Q8NFH4	326 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	UBALD1	Q8TB05	177 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	LRRC29	Q8WV35	223 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	MITD1	Q8WV92	249 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	ITLN1	Q8WWA0	313 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	TOMM40L	Q969M1	308 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	MRPL24	Q96A35	216 aa	Known RBP	12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	MEGF10	Q96KG7	1140 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	RHOF	Q9HBH0	211 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	OPN4	Q9UHM6	478 aa		12.09	□□□□□ -0.47
RAB4B-204	ENST00000597476	GIP	P09681	153 aa	Predicted RBP	12.08	□□□□□ -0.48
RAB4B-204	ENST00000597476	PPP3CB	P16298	524 aa		12.08	□□□□□ -0.48
RAB4B-204	ENST00000597476	DNASE1	P24855	282 aa		12.08	□□□□□ -0.48
RAB4B-204	ENST00000597476	PTAFR	P25105	342 aa		12.08	□□□□□ -0.48
RAB4B-204	ENST00000597476	ANKRD55	Q3KP44	614 aa		12.08	□□□□□ -0.48
RAB4B-204	ENST00000597476	TMEM128	Q5BJH2	165 aa		12.08	□□□□□ -0.48
RAB4B-204	ENST00000597476	FAM201A	Q5SY85	155 aa		12.08	□□□□□ -0.48
RAB4B-204	ENST00000597476	ZNF880	Q6PDB4	577 aa		12.08	□□□□□ -0.48
RAB4B-204	ENST00000597476		Q6ZS49	121 aa		12.08	□□□□□ -0.48
RAB4B-204	ENST00000597476	LDLRAD3	Q86YD5	345 aa		12.08	□□□□□ -0.48
RAB4B-204	ENST00000597476	DMRTC2	Q8IXT2	367 aa	Predicted RBP	12.08	□□□□□ -0.48
RAB4B-204	ENST00000597476	ZCCHC24	Q8N2G6	241 aa	Known RBP	12.08	□□□□□ -0.48
RAB4B-204	ENST00000597476	LINC01560	Q8TB33	94 aa		12.08	□□□□□ -0.48
RAB4B-204	ENST00000597476	TREM2	Q9NZC2	230 aa		12.08	□□□□□ -0.48
RAB4B-204	ENST00000597476	BET1	O15155	118 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	IGHV1-46	P01743	117 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	ROS1	P08922	2347 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	ADIPOQ	Q15848	244 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	FAHD2B	Q6P2I3	314 aa	Predicted RBP	12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	KCTD9	Q7L273	389 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	MOGAT3	Q86VF5	341 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	SPERT	Q8NA61	448 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	FAHD2A	Q96GK7	314 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	HYLS1	Q96M11	299 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	TRAF4	Q9BUZ4	470 aa	Predicted RBP	12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	SPACA1	Q9HBV2	294 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	IGHV3OR15-7	A0A075B7D8	119 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	RFPL4A	A6NLU0	287 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	RFPL4AL1	F8VTS6	287 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	SFT2D2	O95562	160 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	ASCL1	P50553	236 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	CASP6	P55212	293 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	ZNF497	Q6ZNH5	498 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	GCSAM	Q8N6F7	178 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	CD177	Q8N6Q3	437 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	OR5M8	Q8NGP6	311 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	OR11L1	Q8NGX0	322 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	TMEM246	Q9BRR3	403 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	DCAF16	Q9NXF7	216 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	HSPB11	Q9Y547	144 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	ATP23	Q9Y6H3	246 aa		12.07	□□□□□ -0.48
RAB4B-204	ENST00000597476	KIAA2026	Q5HYC2	2103 aa		12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	TPR	P12270	2363 aa	Known RBP	12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	TRBV6-6	A0A0A6YYG2	114 aa		12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	IGKV1D-13	A0A0B4J2D9	117 aa		12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	PLSCR5	A0PG75	271 aa		12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	MEX3A	A1L020	520 aa	Known RBP	12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	DBX1	A6NMT0	343 aa		12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	MPTX1	A8MV57	137 aa		12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	SHISA9	B4DS77	424 aa		12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	TRDC	B7Z8K6	153 aa		12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	SH2D1B	O14796	132 aa		12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	SIAH2	O43255	324 aa		12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	DUS4L	O95620	317 aa	Known RBP	12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	OR4A8	P0C604	315 aa		12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	IGKV1-13	P0DP09	117 aa		12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	ZNF81	P51508	661 aa		12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	SEC61A1	P61619	476 aa	Known RBP	12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	LGALSL	Q3ZCW2	172 aa	Predicted RBP	12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	SPIN3	Q5JUX0	258 aa		12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	FAM53A	Q6NSI3	398 aa	Predicted RBP	12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	C11orf88	Q6PI97	169 aa		12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	BOLL	Q8N9W6	283 aa	Known RBP	12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	MOB3A	Q96BX8	217 aa		12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	SEC22A	Q96IW7	307 aa		12.06	□□□□□ -0.48
RAB4B-204	ENST00000597476	GPHA2	Q96T91	129 aa		12.06	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms