RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 PRAMEF5Q5TYX0 476 aa9.06□□□□□ -0.96
VRK3-210ENST00000596121 UBE2UQ5VVX9 321 aa9.06□□□□□ -0.96
VRK3-210ENST00000596121 RSBN1Q5VWQ0 802 aaPredicted RBP9.06□□□□□ -0.96
VRK3-210ENST00000596121 LDLRAD3Q86YD5 345 aa9.06□□□□□ -0.96
VRK3-210ENST00000596121 PPP1R35Q8TAP8 253 aa9.06□□□□□ -0.96
VRK3-210ENST00000596121 SLC25A28Q96A46 364 aa9.06□□□□□ -0.96
VRK3-210ENST00000596121 DPCDQ9BVM2 203 aaPredicted RBP9.06□□□□□ -0.96
VRK3-210ENST00000596121 YTHDF1Q9BYJ9 559 aaKnown RBP9.06□□□□□ -0.96
VRK3-210ENST00000596121 Q9H521 79 aa9.06□□□□□ -0.96
VRK3-210ENST00000596121 IFT22Q9H7X7 185 aa9.06□□□□□ -0.96
VRK3-210ENST00000596121 HEXA-AS1Q9H8Q6 139 aa9.06□□□□□ -0.96
VRK3-210ENST00000596121 TCF7L1Q9HCS4 588 aa9.06□□□□□ -0.96
VRK3-210ENST00000596121 KIF25Q9UIL4 384 aa9.06□□□□□ -0.96
VRK3-210ENST00000596121 BLOC1S6Q9UL45 172 aa9.06□□□□□ -0.96
VRK3-210ENST00000596121 A0A1W2PPH5 198 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 MEGF11A6BM72 1044 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 FAM90A8PA6NJQ4 464 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 ODF3BA8MYP8 253 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 MRPS14O60783 128 aaKnown RBP9.05□□□□□ -0.96
VRK3-210ENST00000596121 OR7C1O76099 320 aaPredicted RBP9.05□□□□□ -0.96
VRK3-210ENST00000596121 RBP4P02753 201 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 CSTBP04080 98 aaKnown RBP9.05□□□□□ -0.96
VRK3-210ENST00000596121 GTF2F2P13984 249 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 OMGP23515 440 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 GABRA5P31644 462 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 QRFPP83859 136 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 RELBQ01201 579 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 MIDNQ504T8 468 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 AWAT2Q6E213 333 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 SIGIRRQ6IA17 410 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 OR10K2Q6IF99 312 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 RTN4RL2Q86UN3 420 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 NKAIN3Q8N8D7 197 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 OR11H6Q8NGC7 330 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 OR13A1Q8NGR1 328 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 THRSPQ92748 146 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 UQCC2Q9BRT2 126 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 ZNRD1Q9P1U0 126 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 RCC2Q9P258 522 aaKnown RBP9.05□□□□□ -0.96
VRK3-210ENST00000596121 UBE2J1Q9Y385 318 aaPredicted RBP9.05□□□□□ -0.96
VRK3-210ENST00000596121 AK6Q9Y3D8 172 aaKnown RBP9.05□□□□□ -0.96
VRK3-210ENST00000596121 LRRC42Q9Y546 428 aa9.05□□□□□ -0.96
VRK3-210ENST00000596121 TRGV10A0A0A0MS01 117 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 FAM181BA6NEQ2 426 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 SLC22A1O15245 554 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 ZNF780AO75290 641 aaPredicted RBP9.04□□□□□ -0.96
VRK3-210ENST00000596121 FBP1P09467 338 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 VSIG8P0DPA2 414 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 HKR1P10072 659 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 MGMTP16455 207 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 JUNBP17275 347 aaPredicted RBP9.04□□□□□ -0.96
VRK3-210ENST00000596121 COMPP49747 757 aaPredicted RBP9.04□□□□□ -0.96
VRK3-210ENST00000596121 PAX5Q02548 391 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 UNC119Q13432 240 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 ZNF626Q68DY1 528 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 C16orf87Q6PH81 154 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 ZNF773Q6PK81 442 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 CD200R1LQ6Q8B3 271 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 TRAPPC6BQ86SZ2 158 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 BEND2Q8NDZ0 799 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 PIFOQ8TCI5 191 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 SSMEM1Q8WWF3 244 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 DYRK2Q92630 601 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 FAM46BQ96A09 425 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 FOXRED1Q96CU9 486 aaPredicted RBP9.04□□□□□ -0.96
VRK3-210ENST00000596121 Q96M66 194 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 S100A13Q99584 98 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 SELENOIQ9C0D9 397 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 NCOR1P1Q9H4R4 102 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 NDUFB11Q9NX14 153 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 FAM96BQ9Y3D0 163 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 SESN1Q9Y6P5 492 aa9.04□□□□□ -0.96
VRK3-210ENST00000596121 MEIKINA0A087WXM9 373 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 A0A0A6YYD4 124 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 IGHV2-26A0A0B4J1V2 119 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 hCG_1809904A0A1W2PP81 198 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 A0A1W2PPE2 198 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 A0A1W2PR64 198 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 A0A1W2PRV1 198 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 FAM172BPA6NC97 362 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 CRTAPO75718 401 aaPredicted RBP9.03□□□□□ -0.96
VRK3-210ENST00000596121 CLPXO76031 633 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 MT-ND4P03905 459 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 ARG1P05089 322 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 CDK2P24941 298 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 PSMA1P25786 263 aaKnown RBP9.03□□□□□ -0.96
VRK3-210ENST00000596121 CALRP27797 417 aaKnown RBP9.03□□□□□ -0.96
VRK3-210ENST00000596121 ACTG1P63261 375 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 PLA2G7Q13093 441 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 GPR176Q14439 515 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 P2RY14Q15391 338 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 TRAM1Q15629 374 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 MPV17LQ2QL34 196 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 ATAD3CQ5T2N8 411 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 GLT8D1Q68CQ7 371 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 FAM53AQ6NSI3 398 aaPredicted RBP9.03□□□□□ -0.96
VRK3-210ENST00000596121 HEPN1Q6WQI6 88 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 C5orf24Q7Z6I8 188 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 SVOPQ8N4V2 548 aa9.03□□□□□ -0.96
VRK3-210ENST00000596121 TMEM86BQ8N661 226 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms