RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 ZNF205O95201 554 aa10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 FCER2P06734 321 aa10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 MUC1P15941 1255 aaPredicted RBP10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 RCVRNP35243 200 aa10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 CEBPDP49716 269 aaPredicted RBP10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 COL10A1Q03692 680 aa10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 RGS21Q2M5E4 152 aa10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 DCDC5Q6ZRR9 648 aa10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 CD177Q8N6Q3 437 aa10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 TMEM229BQ8NBD8 167 aa10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 LIME1Q9H400 295 aa10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 RIMS4Q9H426 269 aaPredicted RBP10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 PLEKHF2Q9H8W4 249 aa10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 MYOZ1Q9NP98 299 aaPredicted RBP10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 ETAA1Q9NY74 926 aa10.94□□□□□ -0.66
SHKBP1-209ENST00000595803 ANKRD20A5PA0PJZ0 165 aa10.93□□□□□ -0.66
SHKBP1-209ENST00000595803 PLA2G10O15496 165 aa10.93□□□□□ -0.66
SHKBP1-209ENST00000595803 CDKN1AP38936 164 aa10.93□□□□□ -0.66
SHKBP1-209ENST00000595803 MDH2P40926 338 aaKnown RBP10.93□□□□□ -0.66
SHKBP1-209ENST00000595803 TAS2R19P59542 299 aa10.93□□□□□ -0.66
SHKBP1-209ENST00000595803 ASAH1Q13510 395 aa10.93□□□□□ -0.66
SHKBP1-209ENST00000595803 DYRK1AQ13627 763 aa10.93□□□□□ -0.66
SHKBP1-209ENST00000595803 TEX36Q5VZQ5 186 aa10.93□□□□□ -0.66
SHKBP1-209ENST00000595803 PEG10Q86TG7 708 aaKnown RBP10.93□□□□□ -0.66
SHKBP1-209ENST00000595803 HOGA1Q86XE5 327 aa10.93□□□□□ -0.66
SHKBP1-209ENST00000595803 WFDC11Q8NEX6 87 aa10.93□□□□□ -0.66
SHKBP1-209ENST00000595803 SNX22Q96L94 193 aa10.93□□□□□ -0.66
SHKBP1-209ENST00000595803 C7orf50Q9BRJ6 194 aaKnown RBP10.93□□□□□ -0.66
SHKBP1-209ENST00000595803 CHST6Q9GZX3 395 aa10.93□□□□□ -0.66
SHKBP1-209ENST00000595803 ZNF665Q9H7R5 613 aa10.93□□□□□ -0.66
SHKBP1-209ENST00000595803 DCAF16Q9NXF7 216 aa10.93□□□□□ -0.66
SHKBP1-209ENST00000595803 EDARQ9UNE0 448 aa10.93□□□□□ -0.66
SHKBP1-209ENST00000595803 ARFGEF3Q5TH69 2177 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 IGKV1D-17A0A075B6S4 117 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 NAP1L6A6NFF2 107 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 ZNF736B4DX44 427 aaPredicted RBP10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 LYNX1G3V0Z9 82 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 H7C1Q1 480 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 LYRM1O43325 122 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 F12P00748 615 aaPredicted RBP10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 GYPAP02724 150 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 LYNX1P0DP58 116 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 DAOP14920 347 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 DTYMKP23919 212 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 FAUP35544 74 aaKnown RBP10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 KCNJ3P48549 501 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 MRPS11P82912 194 aaKnown RBP10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 KLF9Q13886 244 aaPredicted RBP10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 KCNJ8Q15842 424 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 SHEQ5VZ18 495 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 GVQW1Q8N7I0 195 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 ASCC1Q8N9N2 400 aaKnown RBP10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 ANGPTL6Q8NI99 470 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 DYRK2Q92630 601 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 CYYR1Q96J86 154 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 HDHD3Q9BSH5 251 aaPredicted RBP10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 PPA2Q9H2U2 334 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 HRASLSQ9HDD0 168 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 ZNF701Q9NV72 531 aaPredicted RBP10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 ING3Q9NXR8 418 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 ZNF107Q9UII5 783 aaPredicted RBP10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 METRNQ9UJH8 293 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 TBC1D24Q9ULP9 559 aa10.92□□□□□ -0.66
SHKBP1-209ENST00000595803 ROS1P08922 2347 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 TMEM82A0PJX8 343 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 NKX6-3A6NJ46 265 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 NDUFA2O43678 99 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 RAB3DO95716 219 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 TFF1P04155 84 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 AKAIN1P0CW23 69 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 NAT1P18440 290 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 AMY2BP19961 511 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 HLA-DMAP28067 261 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 OR3A3P47888 321 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 EFNA4P52798 201 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 STUMQ69YW2 141 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 STEAP1BQ6NZ63 245 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 ZNF561Q8N587 486 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 BEST4Q8NFU0 473 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 OR4S1Q8NGB4 309 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 OR5D13Q8NGL4 314 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 OR4K15Q8NH41 348 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 DEDD2Q8WXF8 326 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 RAB1CQ92928 201 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 MED30Q96HR3 178 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 CCL13Q99616 98 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 CCL19Q99731 98 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 C11orf54Q9H0W9 315 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 TMEM165Q9HC07 324 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 C12orf4Q9NQ89 552 aa10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 ZNF230Q9UIE0 474 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 HRNRQ86YZ3 2850 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-209ENST00000595803 FAM240BA0A1B0GVZ2 78 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 POM121CA8CG34 1229 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 OVOL3O00110 214 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 PSPNO60542 156 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 MT-ND4P03905 459 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 CD3DP04234 171 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 FCGR3AP08637 254 aa10.9□□□□□ -0.66
SHKBP1-209ENST00000595803 DNASE1P24855 282 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms