RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, human

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-208	ENST00000595726	TK1	P04183	234 aa		10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	GNAO1	P09471	354 aa		10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	IGHV1-8	P0DP01	117 aa		10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	PRKACB	P22694	351 aa		10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	CAPG	P40121	348 aa		10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	POU3F4	P49335	361 aa		10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	GTF2A1	P52655	376 aa	Predicted RBP	10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	MTCP1	P56278	107 aa		10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	IL18R1	Q13478	541 aa		10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	XAF1	Q6GPH4	301 aa		10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	OR5AK2	Q8NH90	309 aa		10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	EMG1	Q92979	244 aa	Known RBP	10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	NOL4L	Q96MY1	436 aa	Predicted RBP	10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	OPALIN	Q96PE5	141 aa		10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	CITED4	Q96RK1	184 aa		10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	COMMD4	Q9H0A8	199 aa		10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	LIN7B	Q9HAP6	207 aa		10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	DIMT1	Q9UNQ2	313 aa	Known RBP	10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	SMAD5-AS1	Q9Y6J3	95 aa		10.85	□□□□□ -0.67
SHKBP1-208	ENST00000595726	TRBV2	A0A0J9YWF9	115 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	IRGM	A1A4Y4	181 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726		H3BUI4	141 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	CCL24	O00175	119 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	LY86	O95711	162 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	RPSA	P08865	295 aa	Known RBP	10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	ZNF728	P0DKX0	622 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	BCL3	P20749	454 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	NPBWR2	P48146	333 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	CDK5R1	Q15078	307 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	OR2G6	Q5TZ20	316 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	C16orf82	Q7Z2V1	217 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726		Q8IYB0	196 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	C8orf59	Q8N0T1	100 aa	Predicted RBP	10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	PARP16	Q8N5Y8	322 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	ASCC1	Q8N9N2	400 aa	Known RBP	10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	TSEN15	Q8WW01	171 aa	Known RBP	10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	RGP1	Q92546	391 aa	Predicted RBP	10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	RFT1	Q96AA3	541 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	AKR1E2	Q96JD6	320 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	SPACA5	Q96QH8	159 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	ZCCHC4	Q9H5U6	513 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	DCLRE1B	Q9H816	532 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	RBFOX1	Q9NWB1	397 aa	Known RBP	10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	IL36RN	Q9UBH0	155 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	LINC00527	Q9UJ94	153 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	DHDH	Q9UQ10	334 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	EXOSC1	Q9Y3B2	195 aa	Known RBP	10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	HSPE1-MOB4	S4R3N1	261 aa		10.84	□□□□□ -0.67
SHKBP1-208	ENST00000595726	IGKV1-12	A0A0C4DH73	117 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726		K7N7A8	449 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	SULT1B1	O43704	296 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	ZNF737	O75373	536 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	CYB5A	P00167	134 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	IGKV1D-12	P01611	117 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	OCM2	P0CE71	109 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	OCM	P0CE72	109 aa	Predicted RBP	10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	OR3A4P	P47883	348 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	GABPB1	Q06547	395 aa	Predicted RBP	10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	PDZK1IP1	Q13113	114 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	DEFB136	Q30KP8	78 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	CCDC58	Q4VC31	144 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	C9orf66	Q5T8R8	295 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	MINOS1	Q5TGZ0	78 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	LAIR2	Q6ISS4	152 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	RPL22L1	Q6P5R6	122 aa	Known RBP	10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	TMPRSS11A	Q6ZMR5	421 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	ZNF695	Q8IW36	515 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	SERPINA12	Q8IW75	414 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	RBM14	Q96PK6	669 aa	Known RBP	10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	CLEC2D	Q9UHP7	191 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	MINOS1-NBL1	R4GNA1	71 aa		10.83	□□□□□ -0.68
SHKBP1-208	ENST00000595726	ALMS1	Q8TCU4	4167 aa		10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	IGHV2-26	A0A0B4J1V2	119 aa		10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	SEC14L6	B5MCN3	397 aa		10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	OR2F2	O95006	317 aa		10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	HAND1	O96004	215 aa		10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	LALBA	P00709	142 aa		10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	MYL12A	P19105	171 aa		10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	ZNF146	Q15072	292 aa		10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	FAM58A	Q8N1B3	248 aa		10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	OR5D18	Q8NGL1	313 aa		10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	OR5D14	Q8NGL3	314 aa		10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	FBLIM1	Q8WUP2	373 aa		10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	GGH	Q92820	318 aa		10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	SMIM19	Q96E16	107 aa		10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	TMEM80	Q96HE8	168 aa		10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	VCX	Q9H320	206 aa		10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	SEBOX	Q9HB31	216 aa	Predicted RBP	10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	ZFP57	Q9NU63	452 aa		10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	SIRT4	Q9Y6E7	314 aa	Predicted RBP	10.82	□□□□□ -0.68
SHKBP1-208	ENST00000595726	TMEM82	A0PJX8	343 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	KDM4B	O94953	1096 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	HCK	P08631	526 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	FRMD6-AS1	P0C7T7	363 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	CALCB	P10092	127 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	PRKACA	P17612	351 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	HTR1D	P28221	377 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	SOX2	P48431	317 aa		10.81	□□□□□ -0.68
SHKBP1-208	ENST00000595726	GP2	P55259	537 aa	Known RBP	10.81	□□□□□ -0.68

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