RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 NDNFQ8TB73 568 aa11.93□□□□□ -0.5
USE1-205ENST00000594724 MYDGFQ969H8 173 aa11.93□□□□□ -0.5
USE1-205ENST00000594724 DERL3Q96Q80 235 aa11.93□□□□□ -0.5
USE1-205ENST00000594724 OR5M11Q96RB7 305 aa11.93□□□□□ -0.5
USE1-205ENST00000594724 S100A13Q99584 98 aa11.93□□□□□ -0.5
USE1-205ENST00000594724 CLEC7AQ9BXN2 247 aa11.93□□□□□ -0.5
USE1-205ENST00000594724 GAL3ST2Q9H3Q3 398 aa11.93□□□□□ -0.5
USE1-205ENST00000594724 C16orf95Q9H693 158 aa11.93□□□□□ -0.5
USE1-205ENST00000594724 SCN3BQ9NY72 215 aa11.93□□□□□ -0.5
USE1-205ENST00000594724 TAS2R3Q9NYW6 316 aa11.93□□□□□ -0.5
USE1-205ENST00000594724 CKLFQ9UBR5 152 aa11.93□□□□□ -0.5
USE1-205ENST00000594724 ST3GAL6Q9Y274 331 aa11.93□□□□□ -0.5
USE1-205ENST00000594724 HILPDAQ9Y5L2 63 aa11.93□□□□□ -0.5
USE1-205ENST00000594724 CD1AP06126 327 aa11.92□□□□□ -0.5
USE1-205ENST00000594724 FSTP19883 344 aa11.92□□□□□ -0.5
USE1-205ENST00000594724 RBM11P57052 281 aaKnown RBP11.92□□□□□ -0.5
USE1-205ENST00000594724 PROK1P58294 105 aa11.92□□□□□ -0.5
USE1-205ENST00000594724 INSL4Q14641 139 aa11.92□□□□□ -0.5
USE1-205ENST00000594724 C17orf58Q2M2W7 97 aa11.92□□□□□ -0.5
USE1-205ENST00000594724 SLC22A6Q4U2R8 563 aa11.92□□□□□ -0.5
USE1-205ENST00000594724 BRICD5Q6PL45 260 aa11.92□□□□□ -0.5
USE1-205ENST00000594724 JAGN1Q8N5M9 183 aa11.92□□□□□ -0.5
USE1-205ENST00000594724 PLPPR1Q8TBJ4 325 aa11.92□□□□□ -0.5
USE1-205ENST00000594724 MUL1Q969V5 352 aa11.92□□□□□ -0.5
USE1-205ENST00000594724 FOXRED1Q96CU9 486 aaPredicted RBP11.92□□□□□ -0.5
USE1-205ENST00000594724 MND1Q9BWT6 205 aa11.92□□□□□ -0.5
USE1-205ENST00000594724 IL36GQ9NZH8 169 aa11.92□□□□□ -0.5
USE1-205ENST00000594724 KIF25Q9UIL4 384 aa11.92□□□□□ -0.5
USE1-205ENST00000594724 FOXJ3Q9UPW0 622 aa11.92□□□□□ -0.5
USE1-205ENST00000594724 SIGLEC9Q9Y336 463 aa11.92□□□□□ -0.5
USE1-205ENST00000594724 MEIKINA0A087WXM9 373 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 TRAV39A0A0B4J263 110 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 MEGF11A6BM72 1044 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 VGLL3A8MV65 326 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 GEMIN2O14893 280 aaKnown RBP11.91□□□□□ -0.5
USE1-205ENST00000594724 CHST1O43916 411 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 OR7C1O76099 320 aaPredicted RBP11.91□□□□□ -0.5
USE1-205ENST00000594724 CGB3P0DN86 165 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 CGB7P0DN87 165 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 MYF6P23409 242 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 GLP1RP43220 463 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 UTF1Q5T230 341 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 RNLSQ5VYX0 342 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 OR52W1Q6IF63 320 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 CCBE1Q6UXH8 406 aaPredicted RBP11.91□□□□□ -0.5
USE1-205ENST00000594724 SUMF2Q8NBJ7 301 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 OR4D6Q8NGJ1 314 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 OR4P4Q8NGL7 312 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 OR13A1Q8NGR1 328 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 CDCA4Q9BXL8 241 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 BARHL1Q9BZE3 327 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 ZNF696Q9H7X3 374 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 ABCB10Q9NRK6 738 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 OR6C3Q9NZP0 311 aa11.91□□□□□ -0.5
USE1-205ENST00000594724 MRPS28Q9Y2Q9 187 aaKnown RBP11.91□□□□□ -0.5
USE1-205ENST00000594724 LSM2Q9Y333 95 aaKnown RBP11.91□□□□□ -0.5
USE1-205ENST00000594724 KBTBD11-OT1A0A1B0GTJ5 212 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 ZNF729A6NN14 1252 aaPredicted RBP11.9□□□□□ -0.5
USE1-205ENST00000594724 H0YHG0 523 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 NFYBP25208 207 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 SLC35A2P78381 396 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 BDH1Q02338 343 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 SPHARQ15513 63 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 MED22Q15528 200 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 ACSM3Q53FZ2 586 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 NHLRC3Q5JS37 347 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 PRR31Q5SQ13 230 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 ATAD3CQ5T2N8 411 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 MINOS1Q5TGZ0 78 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 RSBN1Q5VWQ0 802 aaPredicted RBP11.9□□□□□ -0.5
USE1-205ENST00000594724 GLIPR1L1Q6UWM5 242 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 IZUMO2Q6UXV1 221 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 TMEM219Q86XT9 240 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 ZNF565Q8N9K5 539 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 CITED1Q99966 193 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 TMED9Q9BVK6 235 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 DPCDQ9BVM2 203 aaPredicted RBP11.9□□□□□ -0.5
USE1-205ENST00000594724 ANKRD60Q9BZ19 345 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 ZNF286AQ9HBT8 521 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 TPRKBQ9Y3C4 175 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 MINOS1-NBL1R4GNA1 71 aa11.9□□□□□ -0.5
USE1-205ENST00000594724 KIAA2026Q5HYC2 2103 aa11.89□□□□□ -0.51
USE1-205ENST00000594724 A6NDX4 124 aa11.89□□□□□ -0.51
USE1-205ENST00000594724 ZNF780AO75290 641 aaPredicted RBP11.89□□□□□ -0.51
USE1-205ENST00000594724 IGHV3-7P01780 117 aa11.89□□□□□ -0.51
USE1-205ENST00000594724 GTF2F2P13984 249 aa11.89□□□□□ -0.51
USE1-205ENST00000594724 HTR1DP28221 377 aa11.89□□□□□ -0.51
USE1-205ENST00000594724 GABRA5P31644 462 aa11.89□□□□□ -0.51
USE1-205ENST00000594724 GP2P55259 537 aaKnown RBP11.89□□□□□ -0.51
USE1-205ENST00000594724 IRF3Q14653 427 aa11.89□□□□□ -0.51
USE1-205ENST00000594724 FAM27D1Q5T7N8 215 aa11.89□□□□□ -0.51
USE1-205ENST00000594724 AWAT2Q6E213 333 aa11.89□□□□□ -0.51
USE1-205ENST00000594724 UNQ9370/PRO34162Q6UXP9 181 aa11.89□□□□□ -0.51
USE1-205ENST00000594724 RTN4RL2Q86UN3 420 aa11.89□□□□□ -0.51
USE1-205ENST00000594724 RFESDQ8TAC1 157 aa11.89□□□□□ -0.51
USE1-205ENST00000594724 MRGPRDQ8TDS7 321 aa11.89□□□□□ -0.51
USE1-205ENST00000594724 VCX3BQ9H321 246 aa11.89□□□□□ -0.51
USE1-205ENST00000594724 DUSP21Q9H596 190 aa11.89□□□□□ -0.51
USE1-205ENST00000594724 IFT22Q9H7X7 185 aa11.89□□□□□ -0.51
USE1-205ENST00000594724 RAB18Q9NP72 206 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms