RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 C21orf33P30042 268 aaPredicted RBP12.33□□□□□ -0.44
TRIM28-203ENST00000593582 DYNLT3P51808 116 aa12.33□□□□□ -0.44
TRIM28-203ENST00000593582 SLC34A1Q06495 639 aa12.33□□□□□ -0.44
TRIM28-203ENST00000593582 PIGYQ3MUY2 71 aa12.33□□□□□ -0.44
TRIM28-203ENST00000593582 LAIR2Q6ISS4 152 aa12.33□□□□□ -0.44
TRIM28-203ENST00000593582 C11orf88Q6PI97 169 aa12.33□□□□□ -0.44
TRIM28-203ENST00000593582 ZNF596Q8TC21 504 aa12.33□□□□□ -0.44
TRIM28-203ENST00000593582 ORAI1Q96D31 301 aa12.33□□□□□ -0.44
TRIM28-203ENST00000593582 PGLYRP3Q96LB9 341 aa12.33□□□□□ -0.44
TRIM28-203ENST00000593582 NKX3-1Q99801 234 aaPredicted RBP12.33□□□□□ -0.44
TRIM28-203ENST00000593582 PPIL3Q9H2H8 161 aaKnown RBP12.33□□□□□ -0.44
TRIM28-203ENST00000593582 IL36GQ9NZH8 169 aa12.33□□□□□ -0.44
TRIM28-203ENST00000593582 ING4Q9UNL4 249 aa12.33□□□□□ -0.44
TRIM28-203ENST00000593582 TCF19Q9Y242 345 aa12.33□□□□□ -0.44
TRIM28-203ENST00000593582 ERGIC3Q9Y282 383 aa12.33□□□□□ -0.44
TRIM28-203ENST00000593582 DSCAML1Q8TD84 2053 aa12.33□□□□□ -0.44
TRIM28-203ENST00000593582 MEIKINA0A087WXM9 373 aa12.32□□□□□ -0.44
TRIM28-203ENST00000593582 TRAV24A0A0B4J272 114 aa12.32□□□□□ -0.44
TRIM28-203ENST00000593582 PNMA8CA0A1B0GUJ8 204 aa12.32□□□□□ -0.44
TRIM28-203ENST00000593582 ZNF729A6NN14 1252 aaPredicted RBP12.32□□□□□ -0.44
TRIM28-203ENST00000593582 H3BUI4 141 aa12.32□□□□□ -0.44
TRIM28-203ENST00000593582 F2RL2O00254 374 aa12.32□□□□□ -0.44
TRIM28-203ENST00000593582 TOR1AO14656 332 aa12.32□□□□□ -0.44
TRIM28-203ENST00000593582 ZNF780AO75290 641 aaPredicted RBP12.32□□□□□ -0.44
TRIM28-203ENST00000593582 IGFBP3P17936 291 aaPredicted RBP12.32□□□□□ -0.44
TRIM28-203ENST00000593582 CELP19835 753 aa12.32□□□□□ -0.44
TRIM28-203ENST00000593582 KCNJ3P48549 501 aa12.32□□□□□ -0.44
TRIM28-203ENST00000593582 WNT4P56705 351 aa12.32□□□□□ -0.44
TRIM28-203ENST00000593582 RPS11P62280 158 aaKnown RBP eCLIP12.32□□□□□ -0.44
TRIM28-203ENST00000593582 BDH1Q02338 343 aa12.32□□□□□ -0.44
TRIM28-203ENST00000593582 OSR2Q8N2R0 312 aa12.32□□□□□ -0.44
TRIM28-203ENST00000593582 OR4P4Q8NGL7 312 aa12.32□□□□□ -0.44
TRIM28-203ENST00000593582 OR14A2Q96R54 314 aa12.32□□□□□ -0.44
TRIM28-203ENST00000593582 ZNF184Q99676 751 aaPredicted RBP12.32□□□□□ -0.44
TRIM28-203ENST00000593582 PCDHB16Q9NRJ7 776 aa12.32□□□□□ -0.44
TRIM28-203ENST00000593582 ST3GAL6Q9Y274 331 aa12.32□□□□□ -0.44
TRIM28-203ENST00000593582 SIGLEC9Q9Y336 463 aa12.32□□□□□ -0.44
TRIM28-203ENST00000593582 MEGF8Q7Z7M0 2845 aa12.32□□□□□ -0.44
TRIM28-203ENST00000593582 KBTBD11-OT1A0A1B0GTJ5 212 aa12.31□□□□□ -0.44
TRIM28-203ENST00000593582 FAM172BPA6NC97 362 aa12.31□□□□□ -0.44
TRIM28-203ENST00000593582 A6NDX4 124 aa12.31□□□□□ -0.44
TRIM28-203ENST00000593582 GPX5O75715 221 aa12.31□□□□□ -0.44
TRIM28-203ENST00000593582 OR7C1O76099 320 aaPredicted RBP12.31□□□□□ -0.44
TRIM28-203ENST00000593582 FSTP19883 344 aa12.31□□□□□ -0.44
TRIM28-203ENST00000593582 GLP1RP43220 463 aa12.31□□□□□ -0.44
TRIM28-203ENST00000593582 ARHGDIBP52566 201 aa12.31□□□□□ -0.44
TRIM28-203ENST00000593582 NHLRC3Q5JS37 347 aa12.31□□□□□ -0.44
TRIM28-203ENST00000593582 BAIAP2L2Q6UXY1 529 aa12.31□□□□□ -0.44
TRIM28-203ENST00000593582 LINC00596Q86U02 117 aa12.31□□□□□ -0.44
TRIM28-203ENST00000593582 TMEM219Q86XT9 240 aa12.31□□□□□ -0.44
TRIM28-203ENST00000593582 CREB3L1Q96BA8 519 aa12.31□□□□□ -0.44
TRIM28-203ENST00000593582 NCOR1P1Q9H4R4 102 aa12.31□□□□□ -0.44
TRIM28-203ENST00000593582 DPM3Q9P2X0 92 aa12.31□□□□□ -0.44
TRIM28-203ENST00000593582 NKX1-2Q9UD57 310 aaPredicted RBP12.31□□□□□ -0.44
TRIM28-203ENST00000593582 KIF25Q9UIL4 384 aa12.31□□□□□ -0.44
TRIM28-203ENST00000593582 TRAV8-7A0A075B6U6 113 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 TRBV5-7A0A0A0MS05 114 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 A0A1W2PPK0 400 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 LEUTXA8MZ59 168 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 CD1AP06126 327 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 GTF2F2P13984 249 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 SERPINA2P20848 420 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 CD34P28906 385 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 GDNFP39905 211 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 EFNB2P52799 333 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 PRRX1P54821 245 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 RBM11P57052 281 aaKnown RBP12.3□□□□□ -0.44
TRIM28-203ENST00000593582 PAX5Q02548 391 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 GPR176Q14439 515 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 C17orf58Q2M2W7 97 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 SLC22A6Q4U2R8 563 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 CCBE1Q6UXH8 406 aaPredicted RBP12.3□□□□□ -0.44
TRIM28-203ENST00000593582 Q6ZTK2 550 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 JAGN1Q8N5M9 183 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 NANOGP1Q8N7R0 232 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 SUMF2Q8NBJ7 301 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 THRSPQ92748 146 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 DPCDQ9BVM2 203 aaPredicted RBP12.3□□□□□ -0.44
TRIM28-203ENST00000593582 MMP27Q9H306 513 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 IFT22Q9H7X7 185 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 ZNF286AQ9HBT8 521 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 FKBP14Q9NWM8 211 aa12.3□□□□□ -0.44
TRIM28-203ENST00000593582 A0A087X0M5 115 aa12.29□□□□□ -0.44
TRIM28-203ENST00000593582 A0A1B0GX30 115 aa12.29□□□□□ -0.44
TRIM28-203ENST00000593582 MAGEA13PA6NCF6 341 aa12.29□□□□□ -0.44
TRIM28-203ENST00000593582 PTGES3LE9PB15 166 aa12.29□□□□□ -0.44
TRIM28-203ENST00000593582 GEMIN2O14893 280 aaKnown RBP12.29□□□□□ -0.44
TRIM28-203ENST00000593582 IGLV1-47P01700 117 aa12.29□□□□□ -0.44
TRIM28-203ENST00000593582 JUNBP17275 347 aaPredicted RBP12.29□□□□□ -0.44
TRIM28-203ENST00000593582 NFYBP25208 207 aa12.29□□□□□ -0.44
TRIM28-203ENST00000593582 MAPK3P27361 379 aaPredicted RBP12.29□□□□□ -0.44
TRIM28-203ENST00000593582 BRS3P32247 399 aa12.29□□□□□ -0.44
TRIM28-203ENST00000593582 CEACAM3P40198 252 aa12.29□□□□□ -0.44
TRIM28-203ENST00000593582 DOC2BQ14184 412 aa12.29□□□□□ -0.44
TRIM28-203ENST00000593582 C2orf68Q2NKX9 166 aa12.29□□□□□ -0.44
TRIM28-203ENST00000593582 C6orf141Q5SZD1 244 aa12.29□□□□□ -0.44
TRIM28-203ENST00000593582 RSBN1Q5VWQ0 802 aaPredicted RBP12.29□□□□□ -0.44
TRIM28-203ENST00000593582 OR13A1Q8NGR1 328 aa12.29□□□□□ -0.44
TRIM28-203ENST00000593582 MYDGFQ969H8 173 aa12.29□□□□□ -0.44
TRIM28-203ENST00000593582 DERL3Q96Q80 235 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms