RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ACTBL2Q562R1 376 aa11.29□□□□□ -0.6
VMP1-217ENST00000593168 DTX2Q86UW9 622 aa11.29□□□□□ -0.6
VMP1-217ENST00000593168 OR4C16Q8NGL9 310 aa11.29□□□□□ -0.6
VMP1-217ENST00000593168 DPAGT1Q9H3H5 408 aa11.29□□□□□ -0.6
VMP1-217ENST00000593168 PLEKHF2Q9H8W4 249 aa11.29□□□□□ -0.6
VMP1-217ENST00000593168 C12orf4Q9NQ89 552 aa11.29□□□□□ -0.6
VMP1-217ENST00000593168 TREM2Q9NZC2 230 aa11.29□□□□□ -0.6
VMP1-217ENST00000593168 COPZ2Q9P299 210 aa11.29□□□□□ -0.6
VMP1-217ENST00000593168 NLKQ9UBE8 527 aa11.29□□□□□ -0.6
VMP1-217ENST00000593168 DYSFO75923 2080 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 TRBV6-6A0A0A6YYG2 114 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 A0A1W2PPR1 153 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 RFPL4AA6NLU0 287 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 RFPL4AL1F8VTS6 287 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 RAB3DO95716 219 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 NAPSAO96009 420 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 CD8AP01732 235 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 MT-ND4P03905 459 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 FCER2P06734 321 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 HEXAP06865 529 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 PSG2P11465 335 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 HLA-DMAP28067 261 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 PRDX2P32119 198 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 MDH2P40926 338 aaKnown RBP11.28□□□□□ -0.6
VMP1-217ENST00000593168 KCNJ3P48549 501 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 PAN3Q58A45 887 aaKnown RBP11.28□□□□□ -0.6
VMP1-217ENST00000593168 OR52W1Q6IF63 320 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 C11orf71Q6IPW1 123 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 Q6ZS49 121 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 C1orf87Q8N0U7 546 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 BEST4Q8NFU0 473 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 OR4S1Q8NGB4 309 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 OR4K15Q8NH41 348 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 RDH5Q92781 318 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 SNAPC3Q92966 411 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 HDHD3Q9BSH5 251 aaPredicted RBP11.28□□□□□ -0.6
VMP1-217ENST00000593168 ST6GALNAC5Q9BVH7 336 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 CACNG6Q9BXT2 260 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 ETAA1Q9NY74 926 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 DNAJB11Q9UBS4 358 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 OR14J1Q9UGF5 321 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 WIPI2Q9Y4P8 454 aa11.28□□□□□ -0.6
VMP1-217ENST00000593168 OR2AT4A6NND4 320 aa11.27□□□□□ -0.61
VMP1-217ENST00000593168 H7C1Q1 480 aa11.27□□□□□ -0.61
VMP1-217ENST00000593168 SIRPB1O00241 398 aa11.27□□□□□ -0.61
VMP1-217ENST00000593168 LY6G6DO95868 133 aa11.27□□□□□ -0.61
VMP1-217ENST00000593168 CYB5R3P00387 301 aaPredicted RBP11.27□□□□□ -0.61
VMP1-217ENST00000593168 FCGR3AP08637 254 aa11.27□□□□□ -0.61
VMP1-217ENST00000593168 ZNF735P0CB33 412 aa11.27□□□□□ -0.61
VMP1-217ENST00000593168 MUC1P15941 1255 aaPredicted RBP11.27□□□□□ -0.61
VMP1-217ENST00000593168 AMY2BP19961 511 aa11.27□□□□□ -0.61
VMP1-217ENST00000593168 GIFP27352 417 aa11.27□□□□□ -0.61
VMP1-217ENST00000593168 TAS2R46P59540 309 aa11.27□□□□□ -0.61
VMP1-217ENST00000593168 RNASE10Q5GAN6 216 aaKnown RBP11.27□□□□□ -0.61
VMP1-217ENST00000593168 VAX1Q5SQQ9 334 aa11.27□□□□□ -0.61
VMP1-217ENST00000593168 TEX36Q5VZQ5 186 aa11.27□□□□□ -0.61
VMP1-217ENST00000593168 SFRP4Q6FHJ7 346 aaPredicted RBP11.27□□□□□ -0.61
VMP1-217ENST00000593168 PLET1Q6UQ28 207 aa11.27□□□□□ -0.61
VMP1-217ENST00000593168 GAPTQ8N292 157 aa11.27□□□□□ -0.61
VMP1-217ENST00000593168 BPIFB2Q8N4F0 458 aa11.27□□□□□ -0.61
VMP1-217ENST00000593168 BOLLQ8N9W6 283 aaKnown RBP11.27□□□□□ -0.61
VMP1-217ENST00000593168 NEK7Q8TDX7 302 aa11.27□□□□□ -0.61
VMP1-217ENST00000593168 VRK1Q99986 396 aaPredicted RBP11.27□□□□□ -0.61
VMP1-217ENST00000593168 TRAF4Q9BUZ4 470 aaPredicted RBP11.27□□□□□ -0.61
VMP1-217ENST00000593168 TINAGL1Q9GZM7 467 aaPredicted RBP11.27□□□□□ -0.61
VMP1-217ENST00000593168 RAB1BQ9H0U4 201 aa11.27□□□□□ -0.61
VMP1-217ENST00000593168 ZNF701Q9NV72 531 aaPredicted RBP11.27□□□□□ -0.61
VMP1-217ENST00000593168 MCUBQ9NWR8 336 aa11.27□□□□□ -0.61
VMP1-217ENST00000593168 ZNF230Q9UIE0 474 aaPredicted RBP11.27□□□□□ -0.61
VMP1-217ENST00000593168 ZNF222Q9UK12 451 aa11.27□□□□□ -0.61
VMP1-217ENST00000593168 IGKV1D-17A0A075B6S4 117 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 A0A1B0GVG6 124 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 TMEM82A0PJX8 343 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 OOEPA6NGQ2 149 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 DISC1C4P0D8 188 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 TMEM178BH3BS89 294 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 LGALS8O00214 317 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 PSPNO60542 156 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 HPXP02790 462 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 TCRBP04435 133 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 SOD3P08294 240 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 HOXA4Q00056 320 aaPredicted RBP11.26□□□□□ -0.61
VMP1-217ENST00000593168 ZMYND11Q15326 602 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 MICBQ29980 383 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 ZNF782Q6ZMW2 699 aaPredicted RBP11.26□□□□□ -0.61
VMP1-217ENST00000593168 CD177Q8N6Q3 437 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 OR5AP2Q8NGF4 316 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 OR4D10Q8NGI6 311 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 ANGPTL6Q8NI99 470 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 PPP1R35Q8TAP8 253 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 NEU4Q8WWR8 484 aaPredicted RBP11.26□□□□□ -0.61
VMP1-217ENST00000593168 DYRK2Q92630 601 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 CREB3L1Q96BA8 519 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 MARVELD1Q9BSK0 173 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 MMP28Q9H239 520 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 ZNF286AQ9HBT8 521 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 TMEM165Q9HC07 324 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 Q9N2K0 584 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 TMEM106BQ9NUM4 274 aa11.26□□□□□ -0.61
VMP1-217ENST00000593168 SLC2A8Q9NY64 477 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms