RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 DIRAS3O95661 229 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 HOXB1P14653 301 aaPredicted RBP13.41□□□□□ -0.26
MBD1-227ENST00000592060 M6PRP20645 277 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 OR2A2Q6IF42 318 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 Q6P435 159 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 SUN5Q8TC36 379 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 PRRX2Q99811 253 aa13.41□□□□□ -0.26
MBD1-227ENST00000592060 ZSCAN5BA6NJL1 495 aa13.4□□□□□ -0.26
MBD1-227ENST00000592060 IQCF6A8MYZ5 107 aa13.4□□□□□ -0.26
MBD1-227ENST00000592060 BET1O15155 118 aa13.4□□□□□ -0.26
MBD1-227ENST00000592060 MPPED1O15442 326 aa13.4□□□□□ -0.26
MBD1-227ENST00000592060 PHF1O43189 567 aaPredicted RBP13.4□□□□□ -0.26
MBD1-227ENST00000592060 MBPP02686 304 aaPredicted RBP13.4□□□□□ -0.26
MBD1-227ENST00000592060 TK1P04183 234 aa13.4□□□□□ -0.26
MBD1-227ENST00000592060 RAC2P15153 192 aa13.4□□□□□ -0.26
MBD1-227ENST00000592060 SMCO1Q147U7 214 aa13.4□□□□□ -0.26
MBD1-227ENST00000592060 ACSF3Q4G176 576 aaPredicted RBP13.4□□□□□ -0.26
MBD1-227ENST00000592060 C20orf204Q6ZNR8 217 aa13.4□□□□□ -0.26
MBD1-227ENST00000592060 CNEP1R1Q8N9A8 125 aa13.4□□□□□ -0.26
MBD1-227ENST00000592060 WDR31Q8NA23 367 aa13.4□□□□□ -0.26
MBD1-227ENST00000592060 C1orf162Q8NEQ5 155 aaPredicted RBP13.4□□□□□ -0.26
MBD1-227ENST00000592060 SLC25A40Q8TBP6 338 aa13.4□□□□□ -0.26
MBD1-227ENST00000592060 DLL3Q9NYJ7 618 aa13.4□□□□□ -0.26
MBD1-227ENST00000592060 LSM5Q9Y4Y9 91 aaKnown RBP13.4□□□□□ -0.26
MBD1-227ENST00000592060 CELSR3Q9NYQ7 3312 aa13.4□□□□□ -0.26
MBD1-227ENST00000592060 CACNA1GO43497 2377 aa13.4□□□□□ -0.26
MBD1-227ENST00000592060 IGKV1D-13A0A0B4J2D9 117 aa13.4□□□□□ -0.27
MBD1-227ENST00000592060 C3orf85A0A1B0GTC6 90 aa13.4□□□□□ -0.27
MBD1-227ENST00000592060 K7EPK0 472 aa13.4□□□□□ -0.27
MBD1-227ENST00000592060 TAAR5O14804 337 aa13.4□□□□□ -0.27
MBD1-227ENST00000592060 CTXN2P0C2S0 81 aa13.4□□□□□ -0.27
MBD1-227ENST00000592060 IGKV1-13P0DP09 117 aa13.4□□□□□ -0.27
MBD1-227ENST00000592060 GLI4P10075 376 aa13.4□□□□□ -0.27
MBD1-227ENST00000592060 CBR1P16152 277 aa13.4□□□□□ -0.27
MBD1-227ENST00000592060 RPL12P30050 165 aaKnown RBP13.4□□□□□ -0.27
MBD1-227ENST00000592060 ERVK11-1P61568 191 aa13.4□□□□□ -0.27
MBD1-227ENST00000592060 ALKBH6Q3KRA9 238 aa13.4□□□□□ -0.27
MBD1-227ENST00000592060 FAM71E2Q8N5Q1 922 aa13.4□□□□□ -0.27
MBD1-227ENST00000592060 GALNT11Q8NCW6 608 aa13.4□□□□□ -0.27
MBD1-227ENST00000592060 PRSS33Q8NF86 280 aa13.4□□□□□ -0.27
MBD1-227ENST00000592060 OR1S2Q8NGQ3 325 aa13.4□□□□□ -0.27
MBD1-227ENST00000592060 TMED6Q8WW62 240 aa13.4□□□□□ -0.27
MBD1-227ENST00000592060 RDH5Q92781 318 aa13.4□□□□□ -0.27
MBD1-227ENST00000592060 ADAT1Q9BUB4 502 aaKnown RBP13.4□□□□□ -0.27
MBD1-227ENST00000592060 FBXO9Q9UK97 447 aaPredicted RBP13.4□□□□□ -0.27
MBD1-227ENST00000592060 PCDHB10Q9UN67 800 aa13.4□□□□□ -0.27
MBD1-227ENST00000592060 AMDHD2Q9Y303 409 aa13.4□□□□□ -0.27
MBD1-227ENST00000592060 FAM186AA6NE01 2351 aa13.39□□□□□ -0.27
MBD1-227ENST00000592060 HS3ST1O14792 307 aa13.39□□□□□ -0.27
MBD1-227ENST00000592060 IGKV3-15P01624 115 aa13.39□□□□□ -0.27
MBD1-227ENST00000592060 FAM157CP0CG43 387 aa13.39□□□□□ -0.27
MBD1-227ENST00000592060 UCP2P55851 309 aa13.39□□□□□ -0.27
MBD1-227ENST00000592060 HLA-DRB3P79483 266 aa13.39□□□□□ -0.27
MBD1-227ENST00000592060 PCSK4Q6UW60 755 aa13.39□□□□□ -0.27
MBD1-227ENST00000592060 STPG2Q8N412 459 aa13.39□□□□□ -0.27
MBD1-227ENST00000592060 SCCPDHQ8NBX0 429 aa13.39□□□□□ -0.27
MBD1-227ENST00000592060 SECTM1Q8WVN6 248 aa13.39□□□□□ -0.27
MBD1-227ENST00000592060 TAAR6Q96RI8 345 aa13.39□□□□□ -0.27
MBD1-227ENST00000592060 TMEM222Q9H0R3 208 aa13.39□□□□□ -0.27
MBD1-227ENST00000592060 GPR31O00270 319 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 SCGB1D2O95969 90 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 NOVA1P51513 510 aaKnown RBP13.38□□□□□ -0.27
MBD1-227ENST00000592060 SRPXP78539 464 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 FOXF2Q12947 444 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 PSG7Q13046 419 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 RPL7L1Q6DKI1 246 aaKnown RBP13.38□□□□□ -0.27
MBD1-227ENST00000592060 ZNF818PQ6ZRF7 136 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 TBC1D26Q86UD7 250 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 SLC35G3Q8N808 338 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 OR1J1Q8NGS3 322 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 USB1Q9BQ65 265 aaKnown RBP13.38□□□□□ -0.27
MBD1-227ENST00000592060 CABLES2Q9BTV7 478 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 PLEKHA2Q9HB19 425 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 ASF1BQ9NVP2 202 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 TAS2R3Q9NYW6 316 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 TMED3Q9Y3Q3 217 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 B8ZZF3 427 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 HOXD4P09016 255 aaPredicted RBP13.38□□□□□ -0.27
MBD1-227ENST00000592060 MPV17P39210 176 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 ZNF154Q13106 437 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 TMEM268Q5VZI3 342 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 Q8IYB0 196 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 GAPTQ8N292 157 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 OR52M1Q8NGK5 317 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 OR4D5Q8NGN0 318 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 OR4A4PQ8NGN8 299 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 RNF141Q8WVD5 230 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 TMEM56Q96MV1 263 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 NRIP2Q9BQI9 281 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 PIGMQ9H3S5 423 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 OR2S2Q9NQN1 319 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 FBXL17Q9UF56 701 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 POLDIP2Q9Y2S7 368 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 TMEM56-RWDD3S4R434 201 aa13.38□□□□□ -0.27
MBD1-227ENST00000592060 E5RGE8 158 aa13.37□□□□□ -0.27
MBD1-227ENST00000592060 DEGS1O15121 323 aa13.37□□□□□ -0.27
MBD1-227ENST00000592060 GAPDHP04406 335 aaKnown RBP13.37□□□□□ -0.27
MBD1-227ENST00000592060 PGA5P0DJD9 388 aa13.37□□□□□ -0.27
MBD1-227ENST00000592060 SELEP16581 610 aa13.37□□□□□ -0.27
MBD1-227ENST00000592060 RTP5Q14D33 572 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms