RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 RBM11P57052 281 aaKnown RBP8.22□□□□□ -1.09
BRCA1-227ENST00000591849 TPBGQ13641 420 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 INSL4Q14641 139 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 ZNF367Q7RTV3 350 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 LINC00596Q86U02 117 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 NDNFQ8TB73 568 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 C1orf147Q96MC9 270 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-227ENST00000591849 UQCC2Q9BRT2 126 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 DPCDQ9BVM2 203 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-227ENST00000591849 YTHDF1Q9BYJ9 559 aaKnown RBP8.22□□□□□ -1.09
BRCA1-227ENST00000591849 CHIAQ9BZP6 476 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 ABCB10Q9NRK6 738 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 TAS2R3Q9NYW6 316 aa8.22□□□□□ -1.09
BRCA1-227ENST00000591849 TRAV24A0A0B4J272 114 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 FAM181BA6NEQ2 426 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 MCRIP1C9JLW8 97 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 TOR1AO14656 332 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 GEMIN2O14893 280 aaKnown RBP8.21□□□□□ -1.1
BRCA1-227ENST00000591849 DENRO43583 198 aaKnown RBP8.21□□□□□ -1.1
BRCA1-227ENST00000591849 MRPS14O60783 128 aaKnown RBP8.21□□□□□ -1.1
BRCA1-227ENST00000591849 CLPXO76031 633 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 CSN2P05814 226 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 HKR1P10072 659 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 CPEP16870 476 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 CDK2P24941 298 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 NFYBP25208 207 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 IER3P46695 156 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 DLX6P56179 175 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 GABARAPL2P60520 117 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 RPS25P62851 125 aaKnown RBP8.21□□□□□ -1.1
BRCA1-227ENST00000591849 RBM39Q14498 530 aaKnown RBP8.21□□□□□ -1.1
BRCA1-227ENST00000591849 TBCEQ15813 527 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-227ENST00000591849 TAF9Q16594 264 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 MPV17LQ2QL34 196 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 TUSC1Q2TAM9 212 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 FAM27D1Q5T7N8 215 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 PRAMEF5Q5TYX0 476 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 HCP5Q6MZN7 132 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 GDPGP1Q6ZNW5 385 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 LDLRAD3Q86YD5 345 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 C11orf42Q8N5U0 333 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 SUMF2Q8NBJ7 301 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 Q8NFD4 153 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 OR5R1Q8NH85 324 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 PHYHIPQ92561 330 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 DYRK2Q92630 601 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 CORO2AQ92828 525 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 MRPS24Q96EL2 167 aaKnown RBP8.21□□□□□ -1.1
BRCA1-227ENST00000591849 SSX3Q99909 188 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 CLEC7AQ9BXN2 247 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 SELENOIQ9C0D9 397 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 TMEM133Q9H2Q1 129 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 BANF2Q9H503 90 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 PLGRKTQ9HBL7 147 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 SPACA1Q9HBV2 294 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 ACOT13Q9NPJ3 140 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 ZNRD1Q9P1U0 126 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 GHRLQ9UBU3 117 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 KIF25Q9UIL4 384 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 LRRC42Q9Y546 428 aa8.21□□□□□ -1.1
BRCA1-227ENST00000591849 TMEM30CPA0ZSE6 113 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 ZNF729A6NN14 1252 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-227ENST00000591849 GPR137BO60478 399 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 MPIG6BO95866 241 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 UCHL1P09936 223 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 UBBP0CG47 229 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 OMGP23515 440 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 PSMB9P28065 219 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 PRRX1P54821 245 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 FAM189A2Q15884 450 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 LY6EQ16553 131 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 LTC4SQ16873 150 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 LRRC75BQ2VPJ9 315 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 PLA1AQ53H76 456 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 AWAT1Q58HT5 328 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 NHLRC3Q5JS37 347 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 DHRS7BQ6IAN0 325 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-227ENST00000591849 BRICD5Q6PL45 260 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 RTN4RL2Q86UN3 420 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 ABHD12Q8N2K0 398 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 BEND2Q8NDZ0 799 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 OR4F5Q8NH21 305 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 FAM46BQ96A09 425 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 COQ2Q96H96 371 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 CST11Q9H112 138 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 PPIL3Q9H2H8 161 aaKnown RBP8.2□□□□□ -1.1
BRCA1-227ENST00000591849 BEX1Q9HBH7 125 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 ETAA1Q9NY74 926 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 TBL2Q9Y4P3 447 aaKnown RBP8.2□□□□□ -1.1
BRCA1-227ENST00000591849 HILPDAQ9Y5L2 63 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 PEX16Q9Y5Y5 336 aa8.2□□□□□ -1.1
BRCA1-227ENST00000591849 IGHV2-26A0A0B4J1V2 119 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 KBTBD11-OT1A0A1B0GTJ5 212 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 A0A1W2PP11 408 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 H3BUX3 64 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 PDCD5O14737 125 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 MGMTP16455 207 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 GZMHP20718 246 aa8.19□□□□□ -1.1
BRCA1-227ENST00000591849 CALRP27797 417 aaKnown RBP8.19□□□□□ -1.1
BRCA1-227ENST00000591849 HTR1DP28221 377 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms