RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 MAP2K4P45985 399 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 GP2P55259 537 aaKnown RBP7.47□□□□□ -1.21
DNMT1-223ENST00000591239 RBM11P57052 281 aaKnown RBP7.47□□□□□ -1.21
DNMT1-223ENST00000591239 RPL15P61313 204 aaKnown RBP7.47□□□□□ -1.21
DNMT1-223ENST00000591239 TPBGQ13641 420 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 GPR176Q14439 515 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 TAF9Q16594 264 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 GLIPR1L1Q6UWM5 242 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 CEACAM19Q7Z692 300 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 LYPD6Q86Y78 171 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 NKAIN3Q8N8D7 197 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 OR11H6Q8NGC7 330 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 OR4D6Q8NGJ1 314 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 UFD1Q92890 307 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 TMEM203Q969S6 136 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 MUL1Q969V5 352 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 MEGF9Q9H1U4 602 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 PPIL3Q9H2H8 161 aaKnown RBP7.47□□□□□ -1.21
DNMT1-223ENST00000591239 GAL3ST2Q9H3Q3 398 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 IFT22Q9H7X7 185 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 TCF7L1Q9HCS4 588 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 TAS2R3Q9NYW6 316 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 ZNF581Q9P0T4 197 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 MRPS28Q9Y2Q9 187 aaKnown RBP7.47□□□□□ -1.21
DNMT1-223ENST00000591239 SESN1Q9Y6P5 492 aa7.47□□□□□ -1.21
DNMT1-223ENST00000591239 KIAA2026Q5HYC2 2103 aa7.46□□□□□ -1.21
DNMT1-223ENST00000591239 IGHV2-26A0A0B4J1V2 119 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 A0A1W2PP11 408 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 FAM90A8PA6NJQ4 464 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 ODF3BA8MYP8 253 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 GEMIN2O14893 280 aaKnown RBP7.46□□□□□ -1.22
DNMT1-223ENST00000591239 DENRO43583 198 aaKnown RBP7.46□□□□□ -1.22
DNMT1-223ENST00000591239 GPR137BO60478 399 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 OR7C1O76099 320 aaPredicted RBP7.46□□□□□ -1.22
DNMT1-223ENST00000591239 UCHL1P09936 223 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 CPEP16870 476 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 SRMP19623 302 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 OMGP23515 440 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 CDK2P24941 298 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 PAX6P26367 422 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 KCNJ3P48549 501 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 PAX5Q02548 391 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 MLLT11Q13015 90 aaPredicted RBP7.46□□□□□ -1.22
DNMT1-223ENST00000591239 DYNC1I2Q13409 638 aaKnown RBP7.46□□□□□ -1.22
DNMT1-223ENST00000591239 TBCEQ15813 527 aaPredicted RBP7.46□□□□□ -1.22
DNMT1-223ENST00000591239 HSD17B12Q53GQ0 312 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 OXLD1Q5BKU9 147 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 C4orf48Q5BLP8 95 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 PRAMEF5Q5TYX0 476 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 ZNF626Q68DY1 528 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 AWAT2Q6E213 333 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 HEPN1Q6WQI6 88 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 LHFPL4Q7Z7J7 247 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 LINC00596Q86U02 117 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 LRRTM1Q86UE6 522 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 ZNF565Q8N9K5 539 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 SUMF2Q8NBJ7 301 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 OR5R1Q8NH85 324 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 PHYHIPQ92561 330 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 MRPS24Q96EL2 167 aaKnown RBP7.46□□□□□ -1.22
DNMT1-223ENST00000591239 MGLLQ99685 303 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 SSX3Q99909 188 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 UQCC2Q9BRT2 126 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 DPCDQ9BVM2 203 aaPredicted RBP7.46□□□□□ -1.22
DNMT1-223ENST00000591239 BARHL1Q9BZE3 327 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 TMEM133Q9H2Q1 129 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 NCOR1P1Q9H4R4 102 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 Q9H521 79 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 OR6C3Q9NZP0 311 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 C1RLQ9NZP8 487 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 KIF25Q9UIL4 384 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 VPREB3Q9UKI3 123 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 RRP15Q9Y3B9 282 aaKnown RBP7.46□□□□□ -1.22
DNMT1-223ENST00000591239 TBL2Q9Y4P3 447 aaKnown RBP7.46□□□□□ -1.22
DNMT1-223ENST00000591239 FBN3Q75N90 2809 aa7.46□□□□□ -1.22
DNMT1-223ENST00000591239 MEIKINA0A087WXM9 373 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 ZNF729A6NN14 1252 aaPredicted RBP7.45□□□□□ -1.22
DNMT1-223ENST00000591239 H3BUX3 64 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 CGB3P0DN86 165 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 CGB7P0DN87 165 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 MDKP21741 143 aaPredicted RBP7.45□□□□□ -1.22
DNMT1-223ENST00000591239 RAG2P55895 527 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 RPS25P62851 125 aaKnown RBP7.45□□□□□ -1.22
DNMT1-223ENST00000591239 RELBQ01201 579 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 TRAM1Q15629 374 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 AANATQ16613 207 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 C17orf58Q2M2W7 97 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 MPV17LQ2QL34 196 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 LRRC75BQ2VPJ9 315 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 LDLRAD2Q5SZI1 272 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 RSBN1Q5VWQ0 802 aaPredicted RBP7.45□□□□□ -1.22
DNMT1-223ENST00000591239 OR52W1Q6IF63 320 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 BAIAP2L2Q6UXY1 529 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 TMEM91Q6ZNR0 172 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 GDPGP1Q6ZNW5 385 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 ABHD12Q8N2K0 398 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 PLPPR1Q8TBJ4 325 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 FOXRED1Q96CU9 486 aaPredicted RBP7.45□□□□□ -1.22
DNMT1-223ENST00000591239 MALSU1Q96EH3 234 aa7.45□□□□□ -1.22
DNMT1-223ENST00000591239 CLEC7AQ9BXN2 247 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms