RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 SIRPB1O00241 398 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 CCSO14618 274 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 CDIPTO14735 213 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 HS3ST1O14792 307 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 RGS13O14921 159 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 TSC22D2O75157 780 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 SFT2D2O95562 160 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 ZNF44P15621 663 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 CCKARP32238 428 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 FXYD4P59646 89 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 HERV-K104P61576 105 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 MZT1Q08AG7 82 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 SURF2Q15527 256 aaPredicted RBP7.43□□□□□ -1.22
SMAD4-206ENST00000588860 SLC9A3R2Q15599 337 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 PAN3Q58A45 887 aaKnown RBP7.43□□□□□ -1.22
SMAD4-206ENST00000588860 Q5BKY6 102 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 FAM76BQ5HYJ3 339 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 C1QTNF12Q5T7M4 302 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 PRAMEF6Q5VXH4 476 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 Q6P435 159 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 VHLLQ6RSH7 139 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 FIP1L1Q6UN15 594 aaKnown RBP7.43□□□□□ -1.22
SMAD4-206ENST00000588860 Q6ZPA2 131 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 KCTD9Q7L273 389 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 POC1AQ8NBT0 407 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 RELL2Q8NC24 303 aaPredicted RBP7.43□□□□□ -1.22
SMAD4-206ENST00000588860 TMEM185AQ8NFB2 350 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 OR5M8Q8NGP6 311 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 MITD1Q8WV92 249 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 ASB13Q8WXK3 278 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 GTF3AQ92664 365 aaKnown RBP7.43□□□□□ -1.22
SMAD4-206ENST00000588860 RDH5Q92781 318 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 NRIP2Q9BQI9 281 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 RTBDNQ9BSG5 229 aaPredicted RBP7.43□□□□□ -1.22
SMAD4-206ENST00000588860 TMPRSS13Q9BYE2 586 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 FXYD6Q9H0Q3 95 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 WDR13Q9H1Z4 485 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 CLEC4MQ9H2X3 399 aaPredicted RBP7.43□□□□□ -1.22
SMAD4-206ENST00000588860 Q9N2K0 584 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 SLC23A1Q9UHI7 598 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 OPN4Q9UHM6 478 aa7.43□□□□□ -1.22
SMAD4-206ENST00000588860 DYSFO75923 2080 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 TRGV8A0A0C4DH27 118 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 hCG_1807616A0A1W2PRN6 198 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 FAM25EA8MYX2 175 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 C16orf97H3BN30 126 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 SH2D1BO14796 132 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 ZNF205O95201 554 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 DUS4LO95620 317 aaKnown RBP7.42□□□□□ -1.22
SMAD4-206ENST00000588860 NAPSAO96009 420 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 KNG1P01042 644 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 GLAP06280 429 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 CTSDP07339 412 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-206ENST00000588860 ZNF728P0DKX0 622 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 ZNF250P15622 560 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 PPP3CBP16298 524 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 AADACP22760 399 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 GLRA1P23415 457 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 FCGR2CP31995 323 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 CASP6P55212 293 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 ERVK11-1P61568 191 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 RPS23P62266 143 aaKnown RBP7.42□□□□□ -1.22
SMAD4-206ENST00000588860 DHODHQ02127 395 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 KLRB1Q12918 225 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 RBM39Q14498 530 aaKnown RBP7.42□□□□□ -1.22
SMAD4-206ENST00000588860 MSMPQ1L6U9 139 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 TMEM128Q5BJH2 165 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 LY6G6FQ5SQ64 297 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 ZNF660Q6AZW8 331 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-206ENST00000588860 LPCAT3Q6P1A2 487 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 CLEC18BQ6UXF7 455 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 Q6ZS49 121 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 ZNF826PQ6ZT77 177 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 LRP11Q86VZ4 500 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 WFDC8Q8IUA0 241 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 LINC00528Q8N1L1 170 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 SPERTQ8NA61 448 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 OR2Z1Q8NG97 314 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 COQ8AQ8NI60 647 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 MRPL30Q8TCC3 161 aaKnown RBP7.42□□□□□ -1.22
SMAD4-206ENST00000588860 RND1Q92730 232 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 TOMM40LQ969M1 308 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 SYT3Q9BQG1 590 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 PDCD10Q9BUL8 212 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 GON7Q9BXV9 100 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 LIME1Q9H400 295 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 RIMS4Q9H426 269 aaPredicted RBP7.42□□□□□ -1.22
SMAD4-206ENST00000588860 IFT22Q9H7X7 185 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 UFSP2Q9NUQ7 469 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 C1orf123Q9NWV4 160 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 PRR13Q9NZ81 148 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 DUSP13Q9UII6 198 aa7.42□□□□□ -1.22
SMAD4-206ENST00000588860 PLCE1Q9P212 2302 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 LRRK2Q5S007 2527 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 DSCAML1Q8TD84 2053 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 FXYD6-FXYD2A0A087WZ82 144 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 TRBV6-6A0A0A6YYG2 114 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 A0A0B4J2A0 478 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 KIR2DS1A0A191URI9 304 aa7.41□□□□□ -1.22
SMAD4-206ENST00000588860 TRDCB7Z8K6 153 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms