RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ASCC1Q8N9N2 400 aaKnown RBP18.65■□□□□ 0.58
ATG4D-209ENST00000588857 DEFB108BQ8NET1 73 aa18.65■□□□□ 0.58
ATG4D-209ENST00000588857 NEU4Q8WWR8 484 aaPredicted RBP18.65■□□□□ 0.58
ATG4D-209ENST00000588857 MAFIPQ8WZ33 124 aa18.65■□□□□ 0.58
ATG4D-209ENST00000588857 SNAPC3Q92966 411 aa18.65■□□□□ 0.58
ATG4D-209ENST00000588857 OCEL1Q9H607 264 aa18.65■□□□□ 0.58
ATG4D-209ENST00000588857 ITPR2Q14571 2701 aa18.65■□□□□ 0.58
ATG4D-209ENST00000588857 PPIAL4EA0A075B759 164 aa18.64■□□□□ 0.58
ATG4D-209ENST00000588857 PPIAL4DF5H284 164 aa18.64■□□□□ 0.58
ATG4D-209ENST00000588857 M0QYG6 137 aa18.64■□□□□ 0.58
ATG4D-209ENST00000588857 PSPNO60542 156 aa18.64■□□□□ 0.58
ATG4D-209ENST00000588857 NAPSAO96009 420 aa18.64■□□□□ 0.58
ATG4D-209ENST00000588857 TFF1P04155 84 aa18.64■□□□□ 0.58
ATG4D-209ENST00000588857 PPIAL4FP0DN26 164 aa18.64■□□□□ 0.58
ATG4D-209ENST00000588857 SLC6A1P30531 599 aa18.64■□□□□ 0.58
ATG4D-209ENST00000588857 TAS2R46P59540 309 aa18.64■□□□□ 0.58
ATG4D-209ENST00000588857 CHRFAM7AQ494W8 412 aa18.64■□□□□ 0.58
ATG4D-209ENST00000588857 TEX36Q5VZQ5 186 aa18.64■□□□□ 0.58
ATG4D-209ENST00000588857 OR4D10Q8NGI6 311 aa18.64■□□□□ 0.58
ATG4D-209ENST00000588857 ANGPTL6Q8NI99 470 aa18.64■□□□□ 0.58
ATG4D-209ENST00000588857 DPAGT1Q9H3H5 408 aa18.64■□□□□ 0.58
ATG4D-209ENST00000588857 TMEM165Q9HC07 324 aa18.64■□□□□ 0.58
ATG4D-209ENST00000588857 PPIAL4AQ9Y536 164 aa18.64■□□□□ 0.58
ATG4D-209ENST00000588857 TRAV38-1A0A0B4J264 116 aa18.64■□□□□ 0.57
ATG4D-209ENST00000588857 LGALS8O00214 317 aa18.64■□□□□ 0.57
ATG4D-209ENST00000588857 GIFP27352 417 aa18.64■□□□□ 0.57
ATG4D-209ENST00000588857 BTCP35070 178 aa18.64■□□□□ 0.57
ATG4D-209ENST00000588857 HRH1P35367 487 aa18.64■□□□□ 0.57
ATG4D-209ENST00000588857 ATXN7L3Q14CW9 347 aaPredicted RBP18.64■□□□□ 0.57
ATG4D-209ENST00000588857 STUMQ69YW2 141 aa18.64■□□□□ 0.57
ATG4D-209ENST00000588857 ZNF782Q6ZMW2 699 aaPredicted RBP18.64■□□□□ 0.57
ATG4D-209ENST00000588857 PPP1R35Q8TAP8 253 aa18.64■□□□□ 0.57
ATG4D-209ENST00000588857 TINAGL1Q9GZM7 467 aaPredicted RBP18.64■□□□□ 0.57
ATG4D-209ENST00000588857 ING3Q9NXR8 418 aa18.64■□□□□ 0.57
ATG4D-209ENST00000588857 ZNF222Q9UK12 451 aa18.64■□□□□ 0.57
ATG4D-209ENST00000588857 PMP2P02689 132 aa18.63■□□□□ 0.57
ATG4D-209ENST00000588857 OR3A3P47888 321 aa18.63■□□□□ 0.57
ATG4D-209ENST00000588857 KCNJ3P48549 501 aa18.63■□□□□ 0.57
ATG4D-209ENST00000588857 PLET1Q6UQ28 207 aa18.63■□□□□ 0.57
ATG4D-209ENST00000588857 C20orf204Q6ZNR8 217 aa18.63■□□□□ 0.57
ATG4D-209ENST00000588857 Q6ZNX1 250 aa18.63■□□□□ 0.57
ATG4D-209ENST00000588857 DUSP18Q8NEJ0 188 aa18.63■□□□□ 0.57
ATG4D-209ENST00000588857 OR5H2Q8NGV7 314 aa18.63■□□□□ 0.57
ATG4D-209ENST00000588857 ZNF286AQ9HBT8 521 aa18.63■□□□□ 0.57
ATG4D-209ENST00000588857 DLL4Q9NR61 685 aa18.63■□□□□ 0.57
ATG4D-209ENST00000588857 COPZ2Q9P299 210 aa18.63■□□□□ 0.57
ATG4D-209ENST00000588857 METRNQ9UJH8 293 aa18.63■□□□□ 0.57
ATG4D-209ENST00000588857 TMEM82A0PJX8 343 aa18.62■□□□□ 0.57
ATG4D-209ENST00000588857 AMY2AP04746 511 aa18.62■□□□□ 0.57
ATG4D-209ENST00000588857 IFNA6P05013 189 aa18.62■□□□□ 0.57
ATG4D-209ENST00000588857 CSN2P05814 226 aa18.62■□□□□ 0.57
ATG4D-209ENST00000588857 CCR6P51684 374 aa18.62■□□□□ 0.57
ATG4D-209ENST00000588857 ARPC4P59998 168 aa18.62■□□□□ 0.57
ATG4D-209ENST00000588857 ZNF497Q6ZNH5 498 aa18.62■□□□□ 0.57
ATG4D-209ENST00000588857 ZNF561Q8N587 486 aa18.62■□□□□ 0.57
ATG4D-209ENST00000588857 OR5AP2Q8NGF4 316 aa18.62■□□□□ 0.57
ATG4D-209ENST00000588857 OR56B4Q8NH76 319 aa18.62■□□□□ 0.57
ATG4D-209ENST00000588857 PLPPR1Q8TBJ4 325 aa18.62■□□□□ 0.57
ATG4D-209ENST00000588857 C14orf79Q96F83 325 aa18.62■□□□□ 0.57
ATG4D-209ENST00000588857 ANXA10Q9UJ72 324 aa18.62■□□□□ 0.57
ATG4D-209ENST00000588857 DISC1C4P0D8 188 aa18.61■□□□□ 0.57
ATG4D-209ENST00000588857 GYPAP02724 150 aa18.61■□□□□ 0.57
ATG4D-209ENST00000588857 COL8A2P25067 703 aa18.61■□□□□ 0.57
ATG4D-209ENST00000588857 OR3A1P47881 315 aa18.61■□□□□ 0.57
ATG4D-209ENST00000588857 MRPS11P82912 194 aaKnown RBP18.61■□□□□ 0.57
ATG4D-209ENST00000588857 GRK1Q15835 563 aa18.61■□□□□ 0.57
ATG4D-209ENST00000588857 PLA1AQ53H76 456 aa18.61■□□□□ 0.57
ATG4D-209ENST00000588857 C17orf107Q6ZR85 190 aa18.61■□□□□ 0.57
ATG4D-209ENST00000588857 MRPL30Q8TCC3 161 aaKnown RBP18.61■□□□□ 0.57
ATG4D-209ENST00000588857 SDSLQ96GA7 329 aa18.61■□□□□ 0.57
ATG4D-209ENST00000588857 SNX22Q96L94 193 aa18.61■□□□□ 0.57
ATG4D-209ENST00000588857 ZNF665Q9H7R5 613 aa18.61■□□□□ 0.57
ATG4D-209ENST00000588857 PLEKHF2Q9H8W4 249 aa18.61■□□□□ 0.57
ATG4D-209ENST00000588857 Q9N2K0 584 aa18.61■□□□□ 0.57
ATG4D-209ENST00000588857 TRBV6-6A0A0A6YYG2 114 aa18.6■□□□□ 0.57
ATG4D-209ENST00000588857 TMEM30CPA0ZSE6 113 aa18.6■□□□□ 0.57
ATG4D-209ENST00000588857 NKX6-3A6NJ46 265 aa18.6■□□□□ 0.57
ATG4D-209ENST00000588857 POM121CA8CG34 1229 aa18.6■□□□□ 0.57
ATG4D-209ENST00000588857 ZNF737O75373 536 aa18.6■□□□□ 0.57
ATG4D-209ENST00000588857 SSTR2P30874 369 aa18.6■□□□□ 0.57
ATG4D-209ENST00000588857 CDKN1AP38936 164 aa18.6■□□□□ 0.57
ATG4D-209ENST00000588857 SRSF7Q16629 238 aaKnown RBP eCLIP18.6■□□□□ 0.57
ATG4D-209ENST00000588857 GLCCI1Q86VQ1 547 aa18.6■□□□□ 0.57
ATG4D-209ENST00000588857 OR51S1Q8NGJ8 323 aa18.6■□□□□ 0.57
ATG4D-209ENST00000588857 MMP28Q9H239 520 aa18.6■□□□□ 0.57
ATG4D-209ENST00000588857 MYOZ1Q9NP98 299 aaPredicted RBP18.6■□□□□ 0.57
ATG4D-209ENST00000588857 SCP2D1Q9UJQ7 156 aa18.6■□□□□ 0.57
ATG4D-209ENST00000588857 IGKV1D-8A0A087WSZ0 117 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 LYNX1G3V0Z9 82 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 LYNX1P0DP58 116 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 DAOP14920 347 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 KCNJ8Q15842 424 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 VAX1Q5SQQ9 334 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 SLC35E4Q6ICL7 350 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 Q6ZPA2 131 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 Q6ZS49 121 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 PEG10Q86TG7 708 aaKnown RBP18.59■□□□□ 0.57
ATG4D-209ENST00000588857 CCL13Q99616 98 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 SHARPINQ9H0F6 387 aa18.59■□□□□ 0.57
ATG4D-209ENST00000588857 TRAPPC2LQ9UL33 140 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms