RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 ASCC1Q8N9N2 400 aaKnown RBP9.43□□□□□ -0.9
VMP1-207ENST00000588131 POC5Q8NA72 575 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 ZNRF1Q8ND25 227 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 SDSLQ96GA7 329 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 COQ2Q96H96 371 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 ST6GALNAC5Q9BVH7 336 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 C11orf54Q9H0W9 315 aaPredicted RBP9.43□□□□□ -0.9
VMP1-207ENST00000588131 ZNF665Q9H7R5 613 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 TMEM165Q9HC07 324 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 CHMP1AQ9HD42 196 aaPredicted RBP9.43□□□□□ -0.9
VMP1-207ENST00000588131 C12orf4Q9NQ89 552 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 IFT46Q9NQC8 304 aa9.43□□□□□ -0.9
VMP1-207ENST00000588131 TRAV39A0A0B4J263 110 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 NKX6-3A6NJ46 265 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 FCN3O75636 299 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 MT-ND4P03905 459 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 CD3DP04234 171 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 CSF1P09603 554 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 GSTT2BP0CG30 244 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 DTYMKP23919 212 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 HLA-DMAP28067 261 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 SSTR2P30874 369 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 MDH2P40926 338 aaKnown RBP9.42□□□□□ -0.9
VMP1-207ENST00000588131 CBX5P45973 191 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 MRPS15P82914 257 aaKnown RBP9.42□□□□□ -0.9
VMP1-207ENST00000588131 AESQ08117 197 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 GRK1Q15835 563 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 ATPAF1Q5TC12 328 aaPredicted RBP9.42□□□□□ -0.9
VMP1-207ENST00000588131 RSBN1Q5VWQ0 802 aaPredicted RBP9.42□□□□□ -0.9
VMP1-207ENST00000588131 ZNF787Q6DD87 383 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 FAAP20Q6NZ36 180 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 ZNF497Q6ZNH5 498 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 C5orf24Q7Z6I8 188 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 GAPTQ8N292 157 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 FGFRL1Q8N441 504 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 TPRX1Q8N7U7 411 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 TMEM229BQ8NBD8 167 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 OR4D10Q8NGI6 311 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 OR4K15Q8NH41 348 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 SETD6Q8TBK2 473 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 SNX22Q96L94 193 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 TMEM246Q9BRR3 403 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 HRASLSQ9HDD0 168 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 Q9N2K0 584 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 MYOZ1Q9NP98 299 aaPredicted RBP9.42□□□□□ -0.9
VMP1-207ENST00000588131 TAS2R8Q9NYW2 309 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 CTSZQ9UBR2 303 aa9.42□□□□□ -0.9
VMP1-207ENST00000588131 K7N7A8 449 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 M0QYG6 137 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 SIGLEC5O15389 551 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 TMPRSS2O15393 492 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 LYRM1O43325 122 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 PPIHO43447 177 aaKnown RBP9.41□□□□□ -0.9
VMP1-207ENST00000588131 ECDO95905 644 aaPredicted RBP9.41□□□□□ -0.9
VMP1-207ENST00000588131 TK1P04183 234 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 SPNP16150 400 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 BTCP35070 178 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 RFX2P48378 723 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 KCNJ3P48549 501 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 TAS2R19P59542 299 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 DEFA1P59665 94 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 DEFA3P59666 94 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 DYRK1AQ13627 763 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 EDDM3AQ14507 147 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 CARTPTQ16568 116 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 STEAP1BQ6NZ63 245 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 ZNF880Q6PDB4 577 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 ZNF561Q8N587 486 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 ZNF525Q8N782 197 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 TMEM185AQ8NFB2 350 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 BEST4Q8NFU0 473 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 OR4C16Q8NGL9 310 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 CCDC107Q8WV48 283 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 COX4I2Q96KJ9 171 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 TINAGL1Q9GZM7 467 aaPredicted RBP9.41□□□□□ -0.9
VMP1-207ENST00000588131 CHODLQ9H9P2 273 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 ZNF107Q9UII5 783 aaPredicted RBP9.41□□□□□ -0.9
VMP1-207ENST00000588131 KIF25Q9UIL4 384 aa9.41□□□□□ -0.9
VMP1-207ENST00000588131 TRBV6-6A0A0A6YYG2 114 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 TMEM30CPA0ZSE6 113 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 ZNF736B4DX44 427 aaPredicted RBP9.4□□□□□ -0.9
VMP1-207ENST00000588131 MGST3O14880 152 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 ADAM20O43506 726 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 FSTL3O95633 263 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 PMP2P02689 132 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 CD74P04233 296 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 CSN2P05814 226 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 GSTT2P0CG29 244 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 AKAIN1P0CW23 69 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 RCC1P18754 421 aaPredicted RBP9.4□□□□□ -0.9
VMP1-207ENST00000588131 GLIPR1P48060 266 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 AP3S2P59780 193 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 IL13RA1P78552 427 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 RGS21Q2M5E4 152 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 KRBOX4Q5JUW0 171 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 SLC35E4Q6ICL7 350 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 GDPD3Q7L5L3 318 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 PEG10Q86TG7 708 aaKnown RBP9.4□□□□□ -0.9
VMP1-207ENST00000588131 GLCCI1Q86VQ1 547 aa9.4□□□□□ -0.9
VMP1-207ENST00000588131 LURAP1LQ8IV03 231 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms