RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 ARFRP1Q13795 201 aa12.45□□□□□ -0.42
NFIX-208ENST00000587260 CLEC12BQ2HXU8 276 aa12.45□□□□□ -0.42
NFIX-208ENST00000587260 BRICD5Q6PL45 260 aa12.45□□□□□ -0.42
NFIX-208ENST00000587260 DUX4L9Q6RFH8 374 aaPredicted RBP12.45□□□□□ -0.42
NFIX-208ENST00000587260 LRRC75A-AS1Q8N1F1 130 aa12.45□□□□□ -0.42
NFIX-208ENST00000587260 GAPTQ8N292 157 aa12.45□□□□□ -0.42
NFIX-208ENST00000587260 C10orf105Q8TEF2 133 aa12.45□□□□□ -0.42
NFIX-208ENST00000587260 NUDCD2Q8WVJ2 157 aa12.45□□□□□ -0.42
NFIX-208ENST00000587260 DUX4Q9UBX2 424 aa12.45□□□□□ -0.42
NFIX-208ENST00000587260 METRNQ9UJH8 293 aa12.45□□□□□ -0.42
NFIX-208ENST00000587260 IGHV4-30-2A0A087WSY4 118 aa12.44□□□□□ -0.42
NFIX-208ENST00000587260 SIRPB1O00241 398 aa12.44□□□□□ -0.42
NFIX-208ENST00000587260 HSPB6O14558 160 aa12.44□□□□□ -0.42
NFIX-208ENST00000587260 PSPNO60542 156 aa12.44□□□□□ -0.42
NFIX-208ENST00000587260 ECDO95905 644 aaPredicted RBP12.44□□□□□ -0.42
NFIX-208ENST00000587260 NAPSAO96009 420 aa12.44□□□□□ -0.42
NFIX-208ENST00000587260 AMY2BP19961 511 aa12.44□□□□□ -0.42
NFIX-208ENST00000587260 DTYMKP23919 212 aa12.44□□□□□ -0.42
NFIX-208ENST00000587260 TMEM33P57088 247 aa12.44□□□□□ -0.42
NFIX-208ENST00000587260 COL10A1Q03692 680 aa12.44□□□□□ -0.42
NFIX-208ENST00000587260 SRSF7Q16629 238 aaKnown RBP eCLIP12.44□□□□□ -0.42
NFIX-208ENST00000587260 PAN3Q58A45 887 aaKnown RBP12.44□□□□□ -0.42
NFIX-208ENST00000587260 ZNF788Q6ZQV5 615 aa12.44□□□□□ -0.42
NFIX-208ENST00000587260 TRAPPC6BQ86SZ2 158 aa12.44□□□□□ -0.42
NFIX-208ENST00000587260 FAM216BQ8N7L0 139 aa12.44□□□□□ -0.42
NFIX-208ENST00000587260 SETD6Q8TBK2 473 aa12.44□□□□□ -0.42
NFIX-208ENST00000587260 CMSS1Q9BQ75 279 aaKnown RBP12.44□□□□□ -0.42
NFIX-208ENST00000587260 TMEM246Q9BRR3 403 aa12.44□□□□□ -0.42
NFIX-208ENST00000587260 CHST6Q9GZX3 395 aa12.44□□□□□ -0.42
NFIX-208ENST00000587260 SHARPINQ9H0F6 387 aa12.44□□□□□ -0.42
NFIX-208ENST00000587260 TMEM165Q9HC07 324 aa12.44□□□□□ -0.42
NFIX-208ENST00000587260 TRBV6-6A0A0A6YYG2 114 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 TMEM82A0PJX8 343 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 ANKRD20A5PA0PJZ0 165 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 UBE2QL1A1L167 161 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 NKX6-3A6NJ46 265 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 NDUFA2O43678 99 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 CSN2P05814 226 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 CSF1P09603 554 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 SELLP14151 372 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 GIFP27352 417 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 RCVRNP35243 200 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 AP3S2P59780 193 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 ASAH1Q13510 395 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 DYRK1AQ13627 763 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 KLF9Q13886 244 aaPredicted RBP12.43□□□□□ -0.42
NFIX-208ENST00000587260 RNASE12Q5GAN4 147 aaKnown RBP12.43□□□□□ -0.42
NFIX-208ENST00000587260 LYPD2Q6UXB3 125 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 C17orf107Q6ZR85 190 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 HOGA1Q86XE5 327 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 MUC20Q8N307 709 aaPredicted RBP12.43□□□□□ -0.42
NFIX-208ENST00000587260 BPIFB2Q8N4F0 458 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 TOMM5Q8N4H5 51 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 ZNF561Q8N587 486 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 SNX22Q96L94 193 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 CCL13Q99616 98 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 C12orf4Q9NQ89 552 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 TBC1D24Q9ULP9 559 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 MAB21L2Q9Y586 359 aa12.43□□□□□ -0.42
NFIX-208ENST00000587260 CEACAM18A8MTB9 384 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 K7N7A8 449 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 TMPRSS2O15393 492 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 PLA2G10O15496 165 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 ADAM20O43506 726 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 OR3A1P47881 315 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 INPP1P49441 399 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 MRPS15P82914 257 aaKnown RBP12.42□□□□□ -0.42
NFIX-208ENST00000587260 KCNJ8Q15842 424 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 Q6ZS49 121 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 ASCC1Q8N9N2 400 aaKnown RBP12.42□□□□□ -0.42
NFIX-208ENST00000587260 TMEM229BQ8NBD8 167 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 PPP1R35Q8TAP8 253 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 GAFA1Q96PS6 74 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 C7orf50Q9BRJ6 194 aaKnown RBP12.42□□□□□ -0.42
NFIX-208ENST00000587260 FAM234AQ9H0X4 552 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 ZNF665Q9H7R5 613 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 ETAA1Q9NY74 926 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 KAAG1Q9UBP8 84 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 VPS13CQ709C8 3753 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 H7C1Q1 480 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 NDUFS8O00217 210 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 SIGLEC5O15389 551 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 FCGR3AP08637 254 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 RPS2P15880 293 aaKnown RBP12.42□□□□□ -0.42
NFIX-208ENST00000587260 DSCR9P59020 149 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 DEFA1P59665 94 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 DEFA3P59666 94 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 ZNF57Q68EA5 555 aaPredicted RBP12.42□□□□□ -0.42
NFIX-208ENST00000587260 ZNF880Q6PDB4 577 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 ZNF497Q6ZNH5 498 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 DCDC5Q6ZRR9 648 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 KRTAP1-3Q8IUG1 177 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 SPICQ8N5J4 248 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 ZNRF1Q8ND25 227 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 OR4S1Q8NGB4 309 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 DYRK2Q92630 601 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 HDHD3Q9BSH5 251 aaPredicted RBP12.42□□□□□ -0.42
NFIX-208ENST00000587260 NCOR1P1Q9H4R4 102 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 CTSZQ9UBR2 303 aa12.42□□□□□ -0.42
NFIX-208ENST00000587260 TEX15Q9BXT5 2789 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms