RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 KBTBD11-OT1A0A1B0GTJ5 212 aa13.6□□□□□ -0.23
TRIM47-203ENST00000586495 A0A1B0GX30 115 aa13.6□□□□□ -0.23
TRIM47-203ENST00000586495 OOSP1A8MZH6 123 aa13.6□□□□□ -0.23
TRIM47-203ENST00000586495 BUB1B-PAK6H3BSN5 160 aa13.6□□□□□ -0.23
TRIM47-203ENST00000586495 GABRPO00591 440 aa13.6□□□□□ -0.23
TRIM47-203ENST00000586495 C21orf33P30042 268 aaPredicted RBP13.6□□□□□ -0.23
TRIM47-203ENST00000586495 GDNFP39905 211 aa13.6□□□□□ -0.23
TRIM47-203ENST00000586495 MNDAP41218 407 aa13.6□□□□□ -0.23
TRIM47-203ENST00000586495 KCNJ3P48549 501 aa13.6□□□□□ -0.23
TRIM47-203ENST00000586495 RSU1Q15404 277 aa13.6□□□□□ -0.23
TRIM47-203ENST00000586495 C17orf58Q2M2W7 97 aa13.6□□□□□ -0.23
TRIM47-203ENST00000586495 LYG1Q8N1E2 194 aa13.6□□□□□ -0.23
TRIM47-203ENST00000586495 OR9G1Q8NH87 305 aa13.6□□□□□ -0.23
TRIM47-203ENST00000586495 CNIH3Q8TBE1 160 aa13.6□□□□□ -0.23
TRIM47-203ENST00000586495 WIPF2Q8TF74 440 aaPredicted RBP13.6□□□□□ -0.23
TRIM47-203ENST00000586495 OCSTAMPQ9BR26 566 aa13.6□□□□□ -0.23
TRIM47-203ENST00000586495 FAM192AQ9GZU8 254 aa13.6□□□□□ -0.23
TRIM47-203ENST00000586495 TAS2R4Q9NYW5 299 aa13.6□□□□□ -0.23
TRIM47-203ENST00000586495 NOTCH1P46531 2555 aa13.6□□□□□ -0.23
TRIM47-203ENST00000586495 MEIKINA0A087WXM9 373 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 G3V4G9 280 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 HSPB6O14558 160 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 XPNPEP2O43895 674 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 WBP4O75554 376 aaKnown RBP13.59□□□□□ -0.23
TRIM47-203ENST00000586495 OR2F2O95006 317 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 NFYBP25208 207 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 GLP1RP43220 463 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 PPP3R1P63098 170 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 MED21Q13503 144 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 RBM39Q14498 530 aaKnown RBP13.59□□□□□ -0.23
TRIM47-203ENST00000586495 SMN1Q16637 294 aaKnown RBP13.59□□□□□ -0.23
TRIM47-203ENST00000586495 TPTE2P1Q5T6R2 138 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 Q6ZS46 218 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 Q8NFD4 153 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 OR51A2Q8NGJ7 313 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 TMEM106AQ96A25 262 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 R3HDM4Q96D70 268 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 KIRREL1Q96J84 757 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 RBM14Q96PK6 669 aaKnown RBP13.59□□□□□ -0.23
TRIM47-203ENST00000586495 CITED2Q99967 270 aaPredicted RBP13.59□□□□□ -0.23
TRIM47-203ENST00000586495 METTL9Q9H1A3 318 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 PPIL3Q9H2H8 161 aaKnown RBP13.59□□□□□ -0.23
TRIM47-203ENST00000586495 TMEM138Q9NPI0 162 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 KIF25Q9UIL4 384 aa13.59□□□□□ -0.23
TRIM47-203ENST00000586495 AMMECR1Q9Y4X0 333 aaPredicted RBP13.59□□□□□ -0.23
TRIM47-203ENST00000586495 HTR3BO95264 441 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 CSTBP04080 98 aaKnown RBP13.58□□□□□ -0.24
TRIM47-203ENST00000586495 CGB3P0DN86 165 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 CGB7P0DN87 165 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 MYL12AP19105 171 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 CD24P25063 80 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 OR3A4PP47883 348 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 ETV1P50549 477 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 BEAN1Q3B7T3 259 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 SAMD5Q5TGI4 173 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 OR2G6Q5TZ20 316 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 TTC23Q5W5X9 447 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 ASCL4Q6XD76 172 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 OR10K1Q8NGX5 313 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 RGP1Q92546 391 aaPredicted RBP13.58□□□□□ -0.24
TRIM47-203ENST00000586495 S100A13Q99584 98 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 SLC25A33Q9BSK2 321 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 MMP28Q9H239 520 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 PCDHB16Q9NRJ7 776 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 PAK1IP1Q9NWT1 392 aaPredicted RBP13.58□□□□□ -0.24
TRIM47-203ENST00000586495 CHCHD3Q9NX63 227 aaKnown RBP13.58□□□□□ -0.24
TRIM47-203ENST00000586495 BABAM2Q9NXR7 383 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 CALYQ9NYX4 217 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 ING4Q9UNL4 249 aa13.58□□□□□ -0.24
TRIM47-203ENST00000586495 EXOSC1Q9Y3B2 195 aaKnown RBP13.58□□□□□ -0.24
TRIM47-203ENST00000586495 PLXNB1O43157 2135 aa13.57□□□□□ -0.24
TRIM47-203ENST00000586495 TRAV24A0A0B4J272 114 aa13.57□□□□□ -0.24
TRIM47-203ENST00000586495 LY6LH3BQJ8 138 aa13.57□□□□□ -0.24
TRIM47-203ENST00000586495 IL1AP01583 271 aa13.57□□□□□ -0.24
TRIM47-203ENST00000586495 ZNF93P35789 620 aaPredicted RBP13.57□□□□□ -0.24
TRIM47-203ENST00000586495 PAX5Q02548 391 aa13.57□□□□□ -0.24
TRIM47-203ENST00000586495 TMEM95Q3KNT9 176 aa13.57□□□□□ -0.24
TRIM47-203ENST00000586495 XAF1Q6GPH4 301 aa13.57□□□□□ -0.24
TRIM47-203ENST00000586495 CENPVQ7Z7K6 275 aaPredicted RBP13.57□□□□□ -0.24
TRIM47-203ENST00000586495 SETD9Q8NE22 299 aa13.57□□□□□ -0.24
TRIM47-203ENST00000586495 OR5AU1Q8NGC0 362 aa13.57□□□□□ -0.24
TRIM47-203ENST00000586495 OR10A7Q8NGE5 316 aa13.57□□□□□ -0.24
TRIM47-203ENST00000586495 OR13A1Q8NGR1 328 aa13.57□□□□□ -0.24
TRIM47-203ENST00000586495 RPEQ96AT9 228 aa13.57□□□□□ -0.24
TRIM47-203ENST00000586495 SMIM19Q96E16 107 aa13.57□□□□□ -0.24
TRIM47-203ENST00000586495 C8orf4Q9NR00 106 aa13.57□□□□□ -0.24
TRIM47-203ENST00000586495 IDI2-AS1Q9NZ38 188 aa13.57□□□□□ -0.24
TRIM47-203ENST00000586495 IL36GQ9NZH8 169 aa13.57□□□□□ -0.24
TRIM47-203ENST00000586495 DIMT1Q9UNQ2 313 aaKnown RBP13.57□□□□□ -0.24
TRIM47-203ENST00000586495 ST3GAL6Q9Y274 331 aa13.57□□□□□ -0.24
TRIM47-203ENST00000586495 ZNF281Q9Y2X9 895 aa13.57□□□□□ -0.24
TRIM47-203ENST00000586495 J3QR06 171 aa13.56□□□□□ -0.24
TRIM47-203ENST00000586495 M0QZK8 103 aa13.56□□□□□ -0.24
TRIM47-203ENST00000586495 OGG1O15527 345 aa13.56□□□□□ -0.24
TRIM47-203ENST00000586495 FAM106CPP0CH98 169 aa13.56□□□□□ -0.24
TRIM47-203ENST00000586495 BDKRB2P30411 391 aa13.56□□□□□ -0.24
TRIM47-203ENST00000586495 CD83Q01151 205 aa13.56□□□□□ -0.24
TRIM47-203ENST00000586495 PIGYQ3MUY2 71 aa13.56□□□□□ -0.24
TRIM47-203ENST00000586495 ABCA11PQ4W5N1 156 aa13.56□□□□□ -0.24
TRIM47-203ENST00000586495 NHLRC3Q5JS37 347 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms