RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 C21orf33P30042 268 aaPredicted RBP9.24□□□□□ -0.93
LIG3-207ENST00000586119 KIR3DL2P43630 455 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 GLIPR1P48060 266 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 POU3F4P49335 361 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 TAS2R43P59537 309 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 AESQ08117 197 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 IRF3Q14653 427 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 CCDC58Q4VC31 144 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 KHDC1LQ5JSQ8 128 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 C9orf152Q5JTZ5 239 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 ETV3LQ6ZN32 361 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 TRAPPC6BQ86SZ2 158 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 ZNF329Q86UD4 541 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 FAM58AQ8N1B3 248 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 NANOGP1Q8N7R0 232 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 ADAT3Q96EY9 351 aaPredicted RBP9.24□□□□□ -0.93
LIG3-207ENST00000586119 PELI1Q96FA3 418 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 BORCS8Q96FH0 119 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 RBM14Q96PK6 669 aaKnown RBP9.24□□□□□ -0.93
LIG3-207ENST00000586119 MND1Q9BWT6 205 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 ZNF286AQ9HBT8 521 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 PAK1IP1Q9NWT1 392 aaPredicted RBP9.24□□□□□ -0.93
LIG3-207ENST00000586119 BABAM2Q9NXR7 383 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 DPM3Q9P2X0 92 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 HHLA2Q9UM44 414 aa9.24□□□□□ -0.93
LIG3-207ENST00000586119 DHRS7CA6NNS2 312 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 MGST3O14880 152 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 IGLV1-47P01700 117 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 IGHV3-7P01780 117 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 UBCP0CG48 685 aaKnown RBP9.23□□□□□ -0.93
LIG3-207ENST00000586119 PRKACAP17612 351 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 AZGP1P25311 298 aaKnown RBP9.23□□□□□ -0.93
LIG3-207ENST00000586119 P2RX3P56373 397 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 WNT4P56705 351 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 BDH1Q02338 343 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 ALKBH1Q13686 389 aaKnown RBP9.23□□□□□ -0.93
LIG3-207ENST00000586119 RPL22L1Q6P5R6 122 aaKnown RBP9.23□□□□□ -0.93
LIG3-207ENST00000586119 MRPL41Q8IXM3 137 aaKnown RBP9.23□□□□□ -0.93
LIG3-207ENST00000586119 SVOPQ8N4V2 548 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 LINC00482Q8N8I6 264 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 ZNF485Q8NCK3 441 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 OR2G2Q8NGZ5 317 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 SPACA5Q96QH8 159 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 CHST5Q9GZS9 411 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 ISG20L2Q9H9L3 353 aaKnown RBP9.23□□□□□ -0.93
LIG3-207ENST00000586119 LIN7BQ9HAP6 207 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 PLEKHA1Q9HB21 404 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 CLEC2DQ9UHP7 191 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 LINC00527Q9UJ94 153 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 GSTK1Q9Y2Q3 226 aa9.23□□□□□ -0.93
LIG3-207ENST00000586119 TMEM212A6NML5 194 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 LY6LH3BQJ8 138 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 OGG1O15527 345 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 OR2F2O95006 317 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 TNFAIP8O95379 198 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 OR2H2O95918 312 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 ALDOBP05062 364 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 ISG15P05161 165 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 CD1AP06126 327 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 ATF1P18846 271 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 SCN1BQ07699 218 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 EGFEM1PQ0D2K5 195 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 DIAPH2-AS1Q14236 149 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 ZNF146Q15072 292 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 TBCEQ15813 527 aaPredicted RBP9.22□□□□□ -0.93
LIG3-207ENST00000586119 OR2G6Q5TZ20 316 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 TMEM244Q5VVB8 128 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 FGGYQ96C11 551 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 RCC1LQ96I51 464 aaKnown RBP9.22□□□□□ -0.93
LIG3-207ENST00000586119 NOL4LQ96MY1 436 aaPredicted RBP9.22□□□□□ -0.93
LIG3-207ENST00000586119 DUX3Q96PT4 197 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 NR1H4Q96RI1 486 aaPredicted RBP9.22□□□□□ -0.93
LIG3-207ENST00000586119 CCDC90BQ9GZT6 254 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 SEBOXQ9HB31 216 aaPredicted RBP9.22□□□□□ -0.93
LIG3-207ENST00000586119 ISYNA1Q9NPH2 558 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.22□□□□□ -0.93
LIG3-207ENST00000586119 FRRS1LQ9P0K9 344 aa9.22□□□□□ -0.93
LIG3-207ENST00000586119 UBE2J1Q9Y385 318 aaPredicted RBP9.22□□□□□ -0.93
LIG3-207ENST00000586119 TRBV2A0A0J9YWF9 115 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 LOC107986453A0A1B0GWG9 222 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 LINC01548A6NM66 108 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 OR4C45A6NMZ5 311 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 LEUTXA8MZ59 168 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 BUB1B-PAK6H3BSN5 160 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 GATBO75879 557 aaKnown RBP9.21□□□□□ -0.94
LIG3-207ENST00000586119 MT-ND2P03891 347 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 SNRNP70P08621 437 aaKnown RBP9.21□□□□□ -0.94
LIG3-207ENST00000586119 ERP29P30040 261 aaKnown RBP9.21□□□□□ -0.94
LIG3-207ENST00000586119 BRS3P32247 399 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 OR3A4PP47883 348 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 RBP2P50120 134 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 ATP1B3P54709 279 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 MTCP1P56278 107 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 RBM39Q14498 530 aaKnown RBP9.21□□□□□ -0.94
LIG3-207ENST00000586119 CDK5R1Q15078 307 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 SPHARQ15513 63 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 C17orf58Q2M2W7 97 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 HLA-DRB5Q30154 266 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 TPTE2P1Q5T6R2 138 aa9.21□□□□□ -0.94
LIG3-207ENST00000586119 Q6P435 159 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms