RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 AQP5P55064 265 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CXCR4P61073 352 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 IL5RAQ01344 420 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 SKP2Q13309 424 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 AANATQ16613 207 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 POU2AF1Q16633 256 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 DUSP7Q16829 419 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TBC1D28Q2M2D7 210 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 NDUFAF6Q330K2 333 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 OR52W1Q6IF63 320 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF621Q6ZSS3 439 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 MBOAT2Q6ZWT7 520 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TMEM86BQ8N661 226 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF614Q8N883 585 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 AQP11Q8NBQ7 271 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 LYPD6BQ8NI32 183 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 PATE1Q8WXA2 126 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 DEDD2Q8WXF8 326 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TMEM54Q969K7 222 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 EXOSC8Q96B26 276 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 PYURFQ96I23 114 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ATF6BQ99941 703 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 APOL4Q9BPW4 351 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 DHRS9Q9BPW9 319 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF426Q9BUY5 554 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TXNIPQ9H3M7 391 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 REEP1Q9H902 201 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 AMBNQ9NP70 447 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TREM1Q9NP99 234 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 INIPQ9NRY2 104 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CA10Q9NS85 328 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF221Q9UK13 617 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 KPTNQ9Y664 436 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CDH10Q9Y6N8 788 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 DOPEY2Q9Y3R5 2298 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 A0A0B4J2E0 115 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 A0A0J9YWU9 116 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 A0A1B0GX12 115 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 NDUFAF8A1L188 74 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ISPDA4D126 451 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CCL21O00585 134 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF354AO60765 605 aaPredicted RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 OR2J2O76002 312 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 RAB36O95755 333 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TMEM50AO95807 157 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 LALBAP00709 142 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CLPSP04118 112 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 HMGN2P05204 90 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 MGMTP16455 207 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF43P17038 809 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TCN1P20061 433 aaPredicted RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 BGNP21810 368 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 FMO3P31513 532 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 OTX1P32242 354 aaPredicted RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 MAGEA2P43356 314 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 RPL29P47914 159 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TAS2R41P59536 307 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 SNRPD2P62316 118 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TSPAN31Q12999 210 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 RIGQ13278 110 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 QPRTQ15274 297 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ZSCAN26Q16670 478 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 C1orf140Q5VVS0 124 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TFAP2EQ6VUC0 442 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ADAMTSL5Q6ZMM2 481 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 PLEKHG7Q6ZR37 379 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 MOB1BQ7L9L4 216 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 DHFR2Q86XF0 187 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 VRK2Q86Y07 508 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 SAXO1Q8IYX7 474 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 OR11L1Q8NGX0 322 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 OR5K1Q8NHB7 308 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 GLYATL2Q8WU03 294 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 C12orf43Q96C57 262 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 RMND5BQ96G75 393 aaPredicted RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TMEM80Q96HE8 168 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 OR8B4Q96RC9 309 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 HBEGFQ99075 208 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 RARRES2Q99969 163 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 RBM4BQ9BQ04 359 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ACTR3CQ9C0K3 210 aaPredicted RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 MFFQ9GZY8 342 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CENPHQ9H3R5 247 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CAB39LQ9H9S4 337 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 TMEM9Q9P0T7 183 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 NOSIPQ9Y314 301 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 V9GY05 133 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 LAMA5O15230 3695 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CROCCQ5TZA2 2017 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 FREM2Q5SZK8 3169 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 RIIAD1A6NNX1 92 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 OOSP1A8MZH6 123 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 GMDSO60547 372 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 NPIPB7O75200 414 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 CA11O75493 328 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 GAS8-AS1O95177 125 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ETHE1O95571 254 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 UBBP0CG47 229 aa1.55□□□□□ -2.16
SMCHD1-211ENST00000584897 ZNF3P17036 446 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms