RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 SPERTQ8NA61 448 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 SCCPDHQ8NBX0 429 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 C2orf50Q96LR7 162 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 ZNF488Q96MN9 340 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 HS3ST6Q96QI5 342 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 IL36RNQ9UBH0 155 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 FAM215AQ9Y5M1 114 aa19.28■□□□□ 0.68
CCDC47-204ENST00000582252 COL6A6A6NMZ7 2263 aa19.27■□□□□ 0.68
CCDC47-204ENST00000582252 KANTRA0A1W2PQU2 76 aa19.27■□□□□ 0.68
CCDC47-204ENST00000582252 LINC00862A6NCI5 91 aa19.27■□□□□ 0.68
CCDC47-204ENST00000582252 H7C1Q1 480 aa19.27■□□□□ 0.68
CCDC47-204ENST00000582252 DEGS1O15121 323 aa19.27■□□□□ 0.68
CCDC47-204ENST00000582252 TK1P04183 234 aa19.27■□□□□ 0.68
CCDC47-204ENST00000582252 KITLGP21583 273 aa19.27■□□□□ 0.68
CCDC47-204ENST00000582252 GCH1P30793 250 aa19.27■□□□□ 0.68
CCDC47-204ENST00000582252 C1QTNF12Q5T7M4 302 aa19.27■□□□□ 0.68
CCDC47-204ENST00000582252 NAA60Q9H7X0 242 aa19.27■□□□□ 0.68
CCDC47-204ENST00000582252 ZNF835Q9Y2P0 537 aa19.27■□□□□ 0.68
CCDC47-204ENST00000582252 NBASA2RRP1 2371 aa19.27■□□□□ 0.68
CCDC47-204ENST00000582252 TRDCB7Z8K6 153 aa19.26■□□□□ 0.67
CCDC47-204ENST00000582252 B3GALNT1O75752 331 aa19.26■□□□□ 0.67
CCDC47-204ENST00000582252 CFDP00746 253 aaPredicted RBP19.26■□□□□ 0.67
CCDC47-204ENST00000582252 IFNA21P01568 189 aa19.26■□□□□ 0.67
CCDC47-204ENST00000582252 ACAA1P09110 424 aaPredicted RBP19.26■□□□□ 0.67
CCDC47-204ENST00000582252 MPV17P39210 176 aa19.26■□□□□ 0.67
CCDC47-204ENST00000582252 UBA52P62987 128 aaKnown RBP19.26■□□□□ 0.67
CCDC47-204ENST00000582252 MZT1Q08AG7 82 aa19.26■□□□□ 0.67
CCDC47-204ENST00000582252 TIMM23BQ5SRD1 257 aa19.26■□□□□ 0.67
CCDC47-204ENST00000582252 FAM185AQ8N0U4 392 aa19.26■□□□□ 0.67
CCDC47-204ENST00000582252 OR5T2Q8NGG2 359 aa19.26■□□□□ 0.67
CCDC47-204ENST00000582252 GALNT14Q96FL9 552 aa19.26■□□□□ 0.67
CCDC47-204ENST00000582252 SUCNR1Q9BXA5 334 aa19.26■□□□□ 0.67
CCDC47-204ENST00000582252 GSX2Q9BZM3 304 aa19.26■□□□□ 0.67
CCDC47-204ENST00000582252 CXXC4Q9H2H0 198 aa19.26■□□□□ 0.67
CCDC47-204ENST00000582252 LIME1Q9H400 295 aa19.26■□□□□ 0.67
CCDC47-204ENST00000582252 SLC25A15Q9Y619 301 aa19.26■□□□□ 0.67
CCDC47-204ENST00000582252 ATP23Q9Y6H3 246 aa19.26■□□□□ 0.67
CCDC47-204ENST00000582252 ESPL1Q14674 2120 aa19.26■□□□□ 0.67
CCDC47-204ENST00000582252 IGHV1-18A0A0C4DH31 117 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 TIMM8AO60220 97 aaPredicted RBP19.25■□□□□ 0.67
CCDC47-204ENST00000582252 ADAP1O75689 374 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 RHBDL1O75783 438 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 PGA5P0DJD9 388 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 ZNF44P15621 663 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 DUSP1P28562 367 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 AP2S1P53680 142 aaPredicted RBP19.25■□□□□ 0.67
CCDC47-204ENST00000582252 C3orf36Q3SXR2 165 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 PCSK4Q6UW60 755 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 WDR86Q86TI4 376 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 RSRP1Q9BUV0 290 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 TREM2Q9NZC2 230 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 PCNX1Q96RV3 2341 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 IGHV2OR16-5A0A0B4J2B6 119 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 ANKRD34BA5PLL1 514 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 PPYP01298 95 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 AADACP22760 399 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 ZNF154Q13106 437 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 MBNL2Q5VZF2 373 aaKnown RBP19.25■□□□□ 0.67
CCDC47-204ENST00000582252 Q6ZPA2 131 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 SCARB1Q8WTV0 552 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 RTN4IP1Q8WWV3 396 aaPredicted RBP19.25■□□□□ 0.67
CCDC47-204ENST00000582252 MBD2Q9UBB5 411 aa19.25■□□□□ 0.67
CCDC47-204ENST00000582252 TRAV24A0A0B4J272 114 aa19.24■□□□□ 0.67
CCDC47-204ENST00000582252 HSPB6O14558 160 aa19.24■□□□□ 0.67
CCDC47-204ENST00000582252 HS3ST1O14792 307 aa19.24■□□□□ 0.67
CCDC47-204ENST00000582252 NXPH2O95156 264 aa19.24■□□□□ 0.67
CCDC47-204ENST00000582252 NUP62P37198 522 aaPredicted RBP19.24■□□□□ 0.67
CCDC47-204ENST00000582252 ERVK11-1P61568 191 aa19.24■□□□□ 0.67
CCDC47-204ENST00000582252 SPIN3Q5JUX0 258 aa19.24■□□□□ 0.67
CCDC47-204ENST00000582252 SHEQ5VZ18 495 aa19.24■□□□□ 0.67
CCDC47-204ENST00000582252 MOB1BQ7L9L4 216 aa19.24■□□□□ 0.67
CCDC47-204ENST00000582252 DOLPP1Q86YN1 238 aa19.24■□□□□ 0.67
CCDC47-204ENST00000582252 SLC2A9Q9NRM0 540 aa19.24■□□□□ 0.67
CCDC47-204ENST00000582252 RASL12Q9NYN1 266 aa19.24■□□□□ 0.67
CCDC47-204ENST00000582252 GLS2Q9UI32 602 aa19.24■□□□□ 0.67
CCDC47-204ENST00000582252 KIF25Q9UIL4 384 aa19.24■□□□□ 0.67
CCDC47-204ENST00000582252 BCL2L11O43521 198 aa19.23■□□□□ 0.67
CCDC47-204ENST00000582252 HOXB5P09067 269 aa19.23■□□□□ 0.67
CCDC47-204ENST00000582252 CEACAM8P31997 349 aaPredicted RBP19.23■□□□□ 0.67
CCDC47-204ENST00000582252 ALKBH6Q3KRA9 238 aa19.23■□□□□ 0.67
CCDC47-204ENST00000582252 IGSF11Q5DX21 431 aa19.23■□□□□ 0.67
CCDC47-204ENST00000582252 MRPL30Q8TCC3 161 aaKnown RBP19.23■□□□□ 0.67
CCDC47-204ENST00000582252 RDH5Q92781 318 aa19.23■□□□□ 0.67
CCDC47-204ENST00000582252 MUCL1Q96DR8 90 aa19.23■□□□□ 0.67
CCDC47-204ENST00000582252 NRIP2Q9BQI9 281 aa19.23■□□□□ 0.67
CCDC47-204ENST00000582252 SPEF1Q9Y4P9 236 aa19.23■□□□□ 0.67
CCDC47-204ENST00000582252 EPG5Q9HCE0 2579 aa19.23■□□□□ 0.67
CCDC47-204ENST00000582252 TRBV6-7A0A0A0MS04 114 aa19.22■□□□□ 0.67
CCDC47-204ENST00000582252 RPS10-NUDT3A0A1W2PQS6 291 aa19.22■□□□□ 0.67
CCDC47-204ENST00000582252 SH2D1BO14796 132 aa19.22■□□□□ 0.67
CCDC47-204ENST00000582252 GRPP07492 148 aa19.22■□□□□ 0.67
CCDC47-204ENST00000582252 ATXN7L3Q14CW9 347 aaPredicted RBP19.22■□□□□ 0.67
CCDC47-204ENST00000582252 PAN3Q58A45 887 aaKnown RBP19.22■□□□□ 0.67
CCDC47-204ENST00000582252 Q6P435 159 aa19.22■□□□□ 0.67
CCDC47-204ENST00000582252 POC1AQ8NBT0 407 aa19.22■□□□□ 0.67
CCDC47-204ENST00000582252 OR4A4PQ8NGN8 299 aa19.22■□□□□ 0.67
CCDC47-204ENST00000582252 DCUN1D4Q92564 292 aa19.22■□□□□ 0.67
CCDC47-204ENST00000582252 PRR13Q9NZ81 148 aa19.22■□□□□ 0.67
CCDC47-204ENST00000582252 IGSF10Q6WRI0 2623 aa19.22■□□□□ 0.67
CCDC47-204ENST00000582252 CDIPTO14735 213 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms