RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 BPIFB2Q8N4F0 458 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 SLC25A38Q96DW6 304 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 C1orf159Q96HA4 380 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 DIRAS2Q96HU8 199 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 ARHGAP5-AS1Q96IT6 56 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 FAAP24Q9BTP7 215 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 PECRQ9BY49 303 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 CHST6Q9GZX3 395 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.86□□□□□ -0.51
SKA2-205ENST00000580541 CTSZQ9UBR2 303 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 MGAT4AQ9UM21 535 aa11.86□□□□□ -0.51
SKA2-205ENST00000580541 POLR3KQ9Y2Y1 108 aaPredicted RBP11.86□□□□□ -0.51
SKA2-205ENST00000580541 TRAV18A0A075B6X5 111 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 TRGV10A0A0A0MS01 117 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 A0A0A6YYD4 124 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 TRAV20A0A0B4J274 112 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 PPIAL4CA0A0B4J2A2 164 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 UBE2QL1A1L167 161 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 ENSAO43768 121 aaKnown RBP11.85□□□□□ -0.51
SKA2-205ENST00000580541 HIST1H1DP16402 221 aaKnown RBP11.85□□□□□ -0.51
SKA2-205ENST00000580541 ELK1P19419 428 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 GZMHP20718 246 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 CDK2P24941 298 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 P2RX3P56373 397 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 TMEM50BP56557 158 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 AESQ08117 197 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 PLA2G7Q13093 441 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 ARFRP1Q13795 201 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 EDDM3AQ14507 147 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 CYB5R2Q6BCY4 276 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 TRAT1Q6PIZ9 186 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 CMSS1Q9BQ75 279 aaKnown RBP11.85□□□□□ -0.51
SKA2-205ENST00000580541 DCTN5Q9BTE1 182 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 PTTG2Q9NZH5 202 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 CSMD2Q7Z408 3487 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 CREBBPQ92793 2442 aa11.85□□□□□ -0.51
SKA2-205ENST00000580541 MED13LQ71F56 2210 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 MEIKINA0A087WXM9 373 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 A0A096LNT2 108 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 A0A1W2PQ09 198 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 FOXI3A8MTJ6 420 aaPredicted RBP11.84□□□□□ -0.51
SKA2-205ENST00000580541 PHF1O43189 567 aaPredicted RBP11.84□□□□□ -0.51
SKA2-205ENST00000580541 TFF1P04155 84 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 EIF4EP06730 217 aaKnown RBP11.84□□□□□ -0.51
SKA2-205ENST00000580541 MSMBP08118 114 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 GNB3P16520 340 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 GNG2P59768 71 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 ATXN7L3Q14CW9 347 aaPredicted RBP11.84□□□□□ -0.51
SKA2-205ENST00000580541 TMEM249Q2WGJ8 235 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 SPANXN2Q5MJ10 180 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 HACD4Q5VWC8 232 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 BRICD5Q6PL45 260 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 METAP1DQ6UB28 335 aaPredicted RBP11.84□□□□□ -0.51
SKA2-205ENST00000580541 ZNF497Q6ZNH5 498 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 C8orf46Q8TAG6 207 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 WDFY2Q96P53 400 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 SULT4A1Q9BR01 284 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 CHMP1AQ9HD42 196 aaPredicted RBP11.84□□□□□ -0.51
SKA2-205ENST00000580541 KCNIP1Q9NZI2 227 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 EXTL2Q9UBQ6 330 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 RPUSD1Q9UJJ7 312 aaKnown RBP11.84□□□□□ -0.51
SKA2-205ENST00000580541 TRAPPC2LQ9UL33 140 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 MRPS7Q9Y2R9 242 aaKnown RBP11.84□□□□□ -0.51
SKA2-205ENST00000580541 UBE2J1Q9Y385 318 aaPredicted RBP11.84□□□□□ -0.51
SKA2-205ENST00000580541 MYO9AB2RTY4 2548 aa11.84□□□□□ -0.51
SKA2-205ENST00000580541 A0A1B0GW55 424 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 ODAMA1E959 279 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 FABP12A6NFH5 140 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 MT-ND4P03905 459 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 MELTFP08582 738 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 DUX4L2P0CJ85 424 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 DUX4L3P0CJ86 424 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 DUX4L4P0CJ87 422 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 DUX4L5P0CJ88 424 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 DUX4L6P0CJ89 424 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 DUX4L7P0CJ90 424 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 PPIAL4GP0DN37 164 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 SELLP14151 372 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 FOSL1P15407 271 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 PTBP1P26599 531 aaKnown RBP eCLIP11.83□□□□□ -0.521e-9■■■■■ 38.2
SKA2-205ENST00000580541 TNFSF8P32971 234 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 PRSS3P35030 304 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 CBX5P45973 191 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 LCN2P80188 198 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 MOGAT2Q3SYC2 334 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 ZNF260Q3ZCT1 412 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 PLAC9Q5JTB6 97 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 C6orf183Q5T699 404 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 DUX4L9Q6RFH8 374 aaPredicted RBP11.83□□□□□ -0.52
SKA2-205ENST00000580541 TRAPPC6BQ86SZ2 158 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 ZNF554Q86TJ5 538 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 GLCCI1Q86VQ1 547 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 CORO2AQ92828 525 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 GAL3ST2Q9H3Q3 398 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 C12orf4Q9NQ89 552 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 TAS2R3Q9NYW6 316 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 DUX4Q9UBX2 424 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 AK3Q9UIJ7 227 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 LINC00312Q9Y6C7 94 aa11.83□□□□□ -0.52
SKA2-205ENST00000580541 YLPM1P49750 1951 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms