RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 SCTP09683 121 aa9.02□□□□□ -0.96
TOP3A-209ENST00000580095 FUT6P51993 359 aa9.02□□□□□ -0.96
TOP3A-209ENST00000580095 DHRS11Q6UWP2 260 aa9.02□□□□□ -0.96
TOP3A-209ENST00000580095 C17orf78Q8N4C9 275 aa9.02□□□□□ -0.96
TOP3A-209ENST00000580095 OR2M7Q8NG81 312 aa9.02□□□□□ -0.96
TOP3A-209ENST00000580095 ZDHHC8Q9ULC8 765 aa9.02□□□□□ -0.96
TOP3A-209ENST00000580095 CYTIPO60759 359 aa9.02□□□□□ -0.97
TOP3A-209ENST00000580095 SFTA3P0C7M3 94 aa9.02□□□□□ -0.97
TOP3A-209ENST00000580095 PRDX4Q13162 271 aa9.02□□□□□ -0.97
TOP3A-209ENST00000580095 ARL6IP1Q15041 203 aa9.02□□□□□ -0.97
TOP3A-209ENST00000580095 MYPOPQ86VE0 399 aaPredicted RBP9.02□□□□□ -0.97
TOP3A-209ENST00000580095 SLC35G3Q8N808 338 aa9.02□□□□□ -0.97
TOP3A-209ENST00000580095 EXTL1Q92935 676 aa9.02□□□□□ -0.97
TOP3A-209ENST00000580095 ZNF552Q9H707 407 aaPredicted RBP9.02□□□□□ -0.97
TOP3A-209ENST00000580095 ZNF286AQ9HBT8 521 aa9.02□□□□□ -0.97
TOP3A-209ENST00000580095 DNAJB11Q9UBS4 358 aa9.02□□□□□ -0.97
TOP3A-209ENST00000580095 IL17BQ9UHF5 180 aa9.02□□□□□ -0.97
TOP3A-209ENST00000580095 HSF4Q9ULV5 492 aa9.02□□□□□ -0.97
TOP3A-209ENST00000580095 STARD10Q9Y365 291 aa9.02□□□□□ -0.97
TOP3A-209ENST00000580095 SVILO95425 2214 aa9.02□□□□□ -0.97
TOP3A-209ENST00000580095 A0A1W2PR80 420 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 SYNGR1O43759 233 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 FUT3P21217 361 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 PPT1P50897 306 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 HERV-K104P61576 105 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 COTL1Q14019 142 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 CLINT1Q14677 625 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 OR8B8Q15620 311 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 TMEM268Q5VZI3 342 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 UQCC3Q6UW78 93 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 FBXW12Q6X9E4 464 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 HPSE2Q8WWQ2 592 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 CPNE4Q96A23 557 aaPredicted RBP9.01□□□□□ -0.97
TOP3A-209ENST00000580095 AKR1E2Q96JD6 320 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 NRIP2Q9BQI9 281 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 DMRT1Q9Y5R6 373 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 CACNA1GO43497 2377 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 LNP1A1A4G5 178 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 NKX2-6A6NCS4 301 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 RNASEK-C17orf49H0YIS7 233 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 HS3ST1O14792 307 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 CST4P01036 141 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 TMEM11P17152 192 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 LHX2P50458 406 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 PCBD1P61457 104 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 SNRPEP62304 92 aaKnown RBP9.01□□□□□ -0.97
TOP3A-209ENST00000580095 OR1C1Q15619 314 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 HIKESHIQ53FT3 197 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 ABHD17BQ5VST6 288 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 SMIM8Q96KF7 97 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 RHOVQ96L33 236 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 C20orf24Q9BUV8 137 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 IGKV1D-13A0A0B4J2D9 117 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 ZNF732B4DXR9 585 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 HSD17B6O14756 317 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 PPYP01298 95 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 IGKV1-13P0DP09 117 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 PVALBP20472 110 aaPredicted RBP9.01□□□□□ -0.97
TOP3A-209ENST00000580095 DTYMKP23919 212 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 CAV2P51636 162 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 TGIF1Q15583 401 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 KRTAP27-1Q3LI81 207 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 MRPL21Q7Z2W9 205 aaKnown RBP9.01□□□□□ -0.97
TOP3A-209ENST00000580095 RDH5Q92781 318 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 MSI2Q96DH6 328 aaKnown RBP9.01□□□□□ -0.97
TOP3A-209ENST00000580095 ZNF703Q9H7S9 590 aaPredicted RBP9.01□□□□□ -0.97
TOP3A-209ENST00000580095 MTCH1Q9NZJ7 389 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 RCC2Q9P258 522 aaKnown RBP9.01□□□□□ -0.97
TOP3A-209ENST00000580095 TUBD1Q9UJT1 453 aa9.01□□□□□ -0.97
TOP3A-209ENST00000580095 KIAA1549Q9HCM3 1950 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 MGAQ8IWI9 3026 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 DCHS1Q96JQ0 3298 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 GVINP1Q7Z2Y8 2422 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 B4E171 279 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 DNPH1O43598 174 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 CA11O75493 328 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 MPLP40238 635 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 GLP1RP43220 463 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 CLDN18P56856 261 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 HOXA4Q00056 320 aaPredicted RBP9□□□□□ -0.97
TOP3A-209ENST00000580095 PLGLB1Q02325 96 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 IZUMO4Q1ZYL8 232 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 RIPPLY2Q5TAB7 128 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 RTL6Q6ICC9 239 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 ASCL4Q6XD76 172 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 LIAT1Q6ZQX7 453 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 NUFIP2Q7Z417 695 aaKnown RBP9□□□□□ -0.97
TOP3A-209ENST00000580095 MEGF10Q96KG7 1140 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 SSX3Q99909 188 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 DECR2Q9NUI1 292 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 BOKQ9UMX3 212 aaPredicted RBP9□□□□□ -0.97
TOP3A-209ENST00000580095 DAOP14920 347 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 RAC2P15153 192 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 GNRHRP30968 328 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 RAB1AP62820 205 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 MIDNQ504T8 468 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 C20orf204Q6ZNR8 217 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 DPPA2Q7Z7J5 298 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 MOB3AQ96BX8 217 aa9□□□□□ -0.97
TOP3A-209ENST00000580095 LURAP1Q96LR2 239 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms