RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 FAM25AB3EWG3 89 aa13.17□□□□□ -0.3
CSNK1D-212ENST00000580061 FAM25CB3EWG5 89 aa13.17□□□□□ -0.3
CSNK1D-212ENST00000580061 FAM25GB3EWG6 89 aa13.17□□□□□ -0.3
CSNK1D-212ENST00000580061 H7C1Q1 480 aa13.17□□□□□ -0.3
CSNK1D-212ENST00000580061 MFNGO00587 321 aa13.17□□□□□ -0.3
CSNK1D-212ENST00000580061 HIST1H1DP16402 221 aaKnown RBP13.17□□□□□ -0.3
CSNK1D-212ENST00000580061 ERP29P30040 261 aaKnown RBP13.17□□□□□ -0.3
CSNK1D-212ENST00000580061 PAX5Q02548 391 aa13.17□□□□□ -0.3
CSNK1D-212ENST00000580061 AESQ08117 197 aa13.17□□□□□ -0.3
CSNK1D-212ENST00000580061 DTX3Q8N9I9 347 aa13.17□□□□□ -0.3
CSNK1D-212ENST00000580061 COQ2Q96H96 371 aa13.17□□□□□ -0.3
CSNK1D-212ENST00000580061 ZMAT3Q9HA38 289 aaKnown RBP13.17□□□□□ -0.3
CSNK1D-212ENST00000580061 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■■□□ 15.5
CSNK1D-212ENST00000580061 PTTG2Q9NZH5 202 aa13.17□□□□□ -0.3
CSNK1D-212ENST00000580061 EXTL2Q9UBQ6 330 aa13.17□□□□□ -0.3
CSNK1D-212ENST00000580061 TRAV18A0A075B6X5 111 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 FOXH1O75593 365 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 CLPXO76031 633 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 GNB3P16520 340 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 ZFP36P26651 326 aaKnown RBP13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 P2RX3P56373 397 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 EDDM3BP56851 147 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 EDDM3AQ14507 147 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 ARL6IP1Q15041 203 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 C11orf91Q3C1V1 193 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 ZNF260Q3ZCT1 412 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 CDNFQ49AH0 187 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 KRBOX4Q5JUW0 171 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 TMEM69Q5SWH9 247 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 RSBN1Q5VWQ0 802 aaPredicted RBP13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 OLFML2AQ68BL7 652 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 SLC35E4Q6ICL7 350 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 CNIH2Q6PI25 160 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 ZNF497Q6ZNH5 498 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 BTN2A1Q7KYR7 527 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 IZUMO1Q8IYV9 350 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 OR4M1Q8NGD0 313 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 H1FXQ92522 213 aaKnown RBP13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 DYRK2Q92630 601 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 WDFY2Q96P53 400 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 DCTN5Q9BTE1 182 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 ETAA1Q9NY74 926 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 AK3Q9UIJ7 227 aa13.16□□□□□ -0.3
CSNK1D-212ENST00000580061 MED13LQ71F56 2210 aa13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 TRBV23-1A0A0A0MS06 115 aa13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 FUOMA2VDF0 154 aa13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 CA11O75493 328 aa13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 ECDO95905 644 aaPredicted RBP13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 GSTP1P09211 210 aaKnown RBP13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 TNFSF8P32971 234 aa13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 S100A5P33763 92 aa13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 GLIPR1P48060 266 aa13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 TAS2R20P59543 309 aa13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 LCN2P80188 198 aa13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 TMEM249Q2WGJ8 235 aa13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 CD276Q5ZPR3 534 aa13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 SPNS3Q6ZMD2 512 aa13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 GAPTQ8N292 157 aa13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 TPRX1Q8N7U7 411 aa13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 OR6Q1Q8NGQ2 317 aa13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 ING3Q9NXR8 418 aa13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 RPUSD1Q9UJJ7 312 aaKnown RBP13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 ELF5Q9UKW6 265 aaPredicted RBP13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 POLR3KQ9Y2Y1 108 aaPredicted RBP13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 KIAA2026Q5HYC2 2103 aa13.15□□□□□ -0.3
CSNK1D-212ENST00000580061 LOC105371242A0A075B767 164 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 TMEM30CPA0ZSE6 113 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 SERPINE3A8MV23 424 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 B4DSR2 109 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 C22orf46C9J442 243 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 HLA-DQB1P01920 261 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 MT-ND4P03905 459 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 MELTFP08582 738 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 IGHV4-31P0DP07 118 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 TALDO1P37837 337 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 RPL31P62899 125 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 PAX2Q02962 417 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 HACD4Q5VWC8 232 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 LY6G5BQ8NDX9 201 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 C8orf46Q8TAG6 207 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 DIRAS2Q96HU8 199 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 NCOR1P1Q9H4R4 102 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 AUNIPQ9H7T9 357 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 LPAR2Q9HBW0 351 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 C19orf12Q9NSK7 152 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 KIF25Q9UIL4 384 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 TEX15Q9BXT5 2789 aa13.14□□□□□ -0.31
CSNK1D-212ENST00000580061 ODAMA1E959 279 aa13.13□□□□□ -0.31
CSNK1D-212ENST00000580061 TMEM235A6NFC5 223 aa13.13□□□□□ -0.31
CSNK1D-212ENST00000580061 SMAD7O15105 426 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-212ENST00000580061 NAPSAO96009 420 aa13.13□□□□□ -0.31
CSNK1D-212ENST00000580061 MSMBP08118 114 aa13.13□□□□□ -0.31
CSNK1D-212ENST00000580061 MNDAP41218 407 aa13.13□□□□□ -0.31
CSNK1D-212ENST00000580061 GZMKP49863 264 aa13.13□□□□□ -0.31
CSNK1D-212ENST00000580061 MEF2CQ06413 473 aaPredicted RBP13.13□□□□□ -0.31
CSNK1D-212ENST00000580061 MADCAM1Q13477 382 aa13.13□□□□□ -0.31
CSNK1D-212ENST00000580061 PNLIPRP3Q17RR3 467 aa13.13□□□□□ -0.31
CSNK1D-212ENST00000580061 TCF23Q7RTU1 214 aa13.13□□□□□ -0.31
CSNK1D-212ENST00000580061 LINC01356Q8N9X3 169 aa13.13□□□□□ -0.31
CSNK1D-212ENST00000580061 MRPL30Q8TCC3 161 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms