RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 CACNG2Q9Y698 323 aa11.67□□□□□ -0.54
CSNK1D-209ENST00000578904 TRAV24A0A0B4J272 114 aa11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 ZNF736B4DX44 427 aaPredicted RBP11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 C3orf80F5H4A9 247 aa11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 PTTG1O95997 202 aa11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 PTHLHP12272 177 aa11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 EGR1P18146 543 aa11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 CD80P33681 288 aa11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 TMEM33P57088 247 aa11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 GUCA2AQ02747 115 aa11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 COL10A1Q03692 680 aa11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 PDCD1Q15116 288 aa11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 SFRP4Q6FHJ7 346 aaPredicted RBP11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 ZNF525Q8N782 197 aa11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 ASCC1Q8N9N2 400 aaKnown RBP11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 GCDHQ92947 438 aaPredicted RBP11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 FOXC2Q99958 501 aa11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 CHODLQ9H9P2 273 aa11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 ZNF286AQ9HBT8 521 aa11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 RAB9BQ9NP90 201 aa11.66□□□□□ -0.54
CSNK1D-209ENST00000578904 TRBV6-6A0A0A6YYG2 114 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 KIR2DS1A0A191URI9 304 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 LINC00854A0A1B0GVQ3 168 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 TMEM30CPA0ZSE6 113 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 LYNX1G3V0Z9 82 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 HSPB6O14558 160 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 MGST3O14880 152 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 LYRM1O43325 122 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 IFNA6P05013 189 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 CSN2P05814 226 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 LYNX1P0DP58 116 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 NAT1P18440 290 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 AMY2BP19961 511 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 KIR2DS4P43632 304 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 OR3A3P47888 321 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 PDLIM4P50479 330 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 BTG1P62324 171 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 IL13RA1P78552 427 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 KIR2DS1Q14954 304 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 TRIM16LQ309B1 348 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 CHRFAM7AQ494W8 412 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 RNASE10Q5GAN6 216 aaKnown RBP11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 Q5PR19 223 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 ATPAF1Q5TC12 328 aaPredicted RBP11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 STUMQ69YW2 141 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 STEAP1BQ6NZ63 245 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 TRAT1Q6PIZ9 186 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 CLEC2AQ6UVW9 174 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 TMEM17Q86X19 198 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 HOGA1Q86XE5 327 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 DEFB108BQ8NET1 73 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 BEST4Q8NFU0 473 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 ANGPTL6Q8NI99 470 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 ENKURQ8TC29 256 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 SDSLQ96GA7 329 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 ST6GALNAC5Q9BVH7 336 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 TMEM165Q9HC07 324 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 KCNIP1Q9NZI2 227 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 COPZ2Q9P299 210 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 ITGB1BP2Q9UKP3 347 aa11.65□□□□□ -0.54
CSNK1D-209ENST00000578904 CSMD1Q96PZ7 3565 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 ARID1AO14497 2285 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 IGKV1D-17A0A075B6S4 117 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 IGHV3OR15-7A0A075B7D8 119 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 FAM240BA0A1B0GVZ2 78 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 MEIS3P1A6NDR6 274 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 DISC1C4P0D8 188 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 RAB3DO95716 219 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 ARPC4P59998 168 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 IFITM3Q01628 133 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 KLF9Q13886 244 aaPredicted RBP11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 GRK1Q15835 563 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 KIAA2026Q5HYC2 2103 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 OLFML2AQ68BL7 652 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 SLC35E4Q6ICL7 350 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 BRICD5Q6PL45 260 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 Q6ZS49 121 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 GDPD3Q7L5L3 318 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 BPIFB2Q8N4F0 458 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 OR5T2Q8NGG2 359 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 OR5H2Q8NGV7 314 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 OR4K15Q8NH41 348 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 PPA2Q9H2U2 334 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 NCOR1P1Q9H4R4 102 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 SCP2D1Q9UJQ7 156 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 TRAPPC2LQ9UL33 140 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 ANAPC10Q9UM13 185 aa11.64□□□□□ -0.55
CSNK1D-209ENST00000578904 K7N7A8 449 aa11.63□□□□□ -0.55
CSNK1D-209ENST00000578904 LANCL1O43813 399 aa11.63□□□□□ -0.55
CSNK1D-209ENST00000578904 SSX5O60225 188 aa11.63□□□□□ -0.55
CSNK1D-209ENST00000578904 RP2O75695 350 aa11.63□□□□□ -0.55
CSNK1D-209ENST00000578904 GYPAP02724 150 aa11.63□□□□□ -0.55
CSNK1D-209ENST00000578904 FCGR3AP08637 254 aa11.63□□□□□ -0.55
CSNK1D-209ENST00000578904 CTXN2P0C2S0 81 aa11.63□□□□□ -0.55
CSNK1D-209ENST00000578904 COL8A2P25067 703 aa11.63□□□□□ -0.55
CSNK1D-209ENST00000578904 PAX5Q02548 391 aa11.63□□□□□ -0.55
CSNK1D-209ENST00000578904 ZMYND11Q15326 602 aa11.63□□□□□ -0.55
CSNK1D-209ENST00000578904 CLEC12BQ2HXU8 276 aa11.63□□□□□ -0.55
CSNK1D-209ENST00000578904 LRRC10Q5BKY1 277 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms