RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 CCDC107Q8WV48 283 aa8.57□□□□□ -1.04
SS18-210ENST00000578700 HPS1Q92902 700 aa8.57□□□□□ -1.04
SS18-210ENST00000578700 EMG1Q92979 244 aaKnown RBP8.57□□□□□ -1.04
SS18-210ENST00000578700 DVL3Q92997 716 aaPredicted RBP8.57□□□□□ -1.04
SS18-210ENST00000578700 CMSS1Q9BQ75 279 aaKnown RBP8.57□□□□□ -1.04
SS18-210ENST00000578700 BPESC1Q9GZL8 116 aa8.57□□□□□ -1.04
SS18-210ENST00000578700 CHST6Q9GZX3 395 aa8.57□□□□□ -1.04
SS18-210ENST00000578700 OR51I2Q9H344 312 aa8.57□□□□□ -1.04
SS18-210ENST00000578700 ZNF442Q9H7R0 627 aa8.57□□□□□ -1.04
SS18-210ENST00000578700 GLS2Q9UI32 602 aa8.57□□□□□ -1.04
SS18-210ENST00000578700 DUSP13Q9UII6 198 aa8.57□□□□□ -1.04
SS18-210ENST00000578700 ALG5Q9Y673 324 aa8.57□□□□□ -1.04
SS18-210ENST00000578700 IGKV1-12A0A0C4DH73 117 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 UBE2QL1A1L167 161 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 FOXI3A8MTJ6 420 aaPredicted RBP8.56□□□□□ -1.04
SS18-210ENST00000578700 ATP6V1G2-DDX39BF2Z307 99 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 NDUFS8O00217 210 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 GEMIN2O14893 280 aaKnown RBP8.56□□□□□ -1.04
SS18-210ENST00000578700 KCNAB3O43448 404 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 SSNA1O43805 119 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 IGKV1D-12P01611 117 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 CD74P04233 296 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 RLN1P04808 185 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 FCER2P06734 321 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 GRPP07492 148 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 SFTPBP07988 381 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 PRKACAP17612 351 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 BCL3P20749 454 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 MPZP25189 248 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 TMEM50BP56557 158 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 ARPC4P59998 168 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 TSPAN5P62079 268 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 RBM39Q14498 530 aaKnown RBP8.56□□□□□ -1.04
SS18-210ENST00000578700 MST1LQ2TV78 715 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 PIGYQ3MUY2 71 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 SCGB2B2Q4G0G5 96 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 NHLRC3Q5JS37 347 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 METTL11BQ5VVY1 283 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 VHLLQ6RSH7 139 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 IDO2Q6ZQW0 420 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 C6orf201Q7Z4U5 140 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 GLCCI1Q86VQ1 547 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 HOGA1Q86XE5 327 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 FAM58AQ8N1B3 248 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 ARRDC1Q8N5I2 433 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 Q8NFD4 153 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 BEST4Q8NFU0 473 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 OR51S1Q8NGJ8 323 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 NEK7Q8TDX7 302 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 ST8SIA4Q92187 359 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 SCGB3A2Q96PL1 93 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 ST6GALNAC5Q9BVH7 336 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 MED28Q9H204 178 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 CHMP1AQ9HD42 196 aaPredicted RBP8.56□□□□□ -1.04
SS18-210ENST00000578700 C12orf4Q9NQ89 552 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 ING3Q9NXR8 418 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 KCNK7Q9Y2U2 307 aa8.56□□□□□ -1.04
SS18-210ENST00000578700 MCRIP1C9JLW8 97 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 M0QYG6 137 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 ARPC1BO15143 372 aaKnown RBP8.55□□□□□ -1.04
SS18-210ENST00000578700 SSX5O60225 188 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 LILRA1O75019 489 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 NXPH2O95156 264 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 VENTXO95231 258 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 CSN2P05814 226 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 GLAP06280 429 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 ZNF250P15622 560 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 TNFSF4P23510 183 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 DTYMKP23919 212 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 CHATP28329 748 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 SNU13P55769 128 aaKnown RBP8.55□□□□□ -1.04
SS18-210ENST00000578700 SNRPD2P62316 118 aaKnown RBP8.55□□□□□ -1.04
SS18-210ENST00000578700 CBX3Q13185 183 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 IKZF1Q13422 519 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 IL13RA2Q14627 380 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 SWI5Q1ZZU3 235 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 TMEM255AQ5JRV8 349 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 FAAP20Q6NZ36 180 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 GVQW1Q8N7I0 195 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 C3orf56Q8N813 242 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 SCCPDHQ8NBX0 429 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 NUP37Q8NFH4 326 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 OR10AD1Q8NGE0 317 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 GIMAP1Q8WWP7 306 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 SNAPC3Q92966 411 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 NEURL2Q9BR09 285 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 FAAP24Q9BTP7 215 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 TINAGL1Q9GZM7 467 aaPredicted RBP8.55□□□□□ -1.04
SS18-210ENST00000578700 RIMS4Q9H426 269 aaPredicted RBP8.55□□□□□ -1.04
SS18-210ENST00000578700 MTCH1Q9NZJ7 389 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 ZNF221Q9UK13 617 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 ELF5Q9UKW6 265 aaPredicted RBP8.55□□□□□ -1.04
SS18-210ENST00000578700 FZR1Q9UM11 496 aa8.55□□□□□ -1.04
SS18-210ENST00000578700 A0A0A6YYJ9 748 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 A6NLC8 198 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 CDIPTO14735 213 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 SH2D1BO14796 132 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 DEGS1O15121 323 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 SYNGR1O43759 233 aa8.54□□□□□ -1.04
SS18-210ENST00000578700 CREBL2O60519 120 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms