RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 SMPD2O60906 423 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 LILRA1O75019 489 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 ATG12O94817 140 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 ZNF14P17017 642 aaPredicted RBP7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 CA6P23280 308 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 GNRHRP30968 328 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 MDH2P40926 338 aaKnown RBP7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 LPAR6P43657 344 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 TNFSF10P50591 281 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 UBE2NP61088 152 aaKnown RBP7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 PPP1CBP62140 327 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 PMP22Q01453 160 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 MRPL49Q13405 166 aaKnown RBP7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 HERPUD1Q15011 391 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 SPIN3Q5JUX0 258 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 C10orf91Q5T1B1 145 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 BTNL8Q6UX41 500 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 TMPRSS7Q7RTY8 843 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 ZNF695Q8IW36 515 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 SELENOHQ8IZQ5 122 aaKnown RBP7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 DMBX1Q8NFW5 382 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 OR52M1Q8NGK5 317 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 IL22RA2Q969J5 263 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 ERGIC1Q969X5 290 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 BSCL2Q96G97 398 aaPredicted RBP7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 ZNF488Q96MN9 340 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 TSNAXQ99598 290 aaKnown RBP7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 OR51B6Q9H340 312 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 C11orf1Q9H5F2 150 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 TREM1Q9NP99 234 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 DLL3Q9NYJ7 618 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 PLA2G2EQ9NZK7 142 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 MYO7BQ6PIF6 2116 aa7.97□□□□□ -1.13
CDK5RAP3-208ENST00000578525 DNAH14Q0VDD8 3507 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 TRAV24A0A0B4J272 114 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 IGKV1D-13A0A0B4J2D9 117 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 IGKV1-6A0A0C4DH72 117 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 NKX2-6A6NCS4 301 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 F8W036 122 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 H0Y980 276 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 HSPB6O14558 160 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 HSD17B6O14756 317 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 DEGS1O15121 323 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 FBXO24O75426 580 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SEC11BP0C7V7 166 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 IGKV1-13P0DP09 117 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 GLI4P10075 376 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 HOXB1P14653 301 aaPredicted RBP7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SELEP16581 610 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 ADCYAP1P18509 176 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 ATF4P18848 351 aaPredicted RBP7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 PVALBP20472 110 aaPredicted RBP7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 IGHV1-2P23083 117 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 UCP1P25874 307 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 S100GP29377 79 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 CAV2P51636 162 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 TGFBR3Q03167 851 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 GNMTQ14749 295 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SWI5Q1ZZU3 235 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SPATA46Q5T0L3 261 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SHEQ5VZ18 495 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 ZNF324BQ6AW86 544 aaPredicted RBP7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 Q6P435 159 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 INO80CQ6PI98 192 aaPredicted RBP7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 ZNF818PQ6ZRF7 136 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 Q6ZRG5 221 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 MOB1BQ7L9L4 216 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 C5orf24Q7Z6I8 188 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 VASH2Q86V25 355 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 Q8IYB0 196 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 H1FOOQ8IZA3 346 aaPredicted RBP7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SPAG16Q8N0X2 631 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 GAPTQ8N292 157 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SVBPQ8N300 66 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 SUMF1Q8NBK3 374 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 USB1Q9BQ65 265 aaKnown RBP7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 GINS3Q9BRX5 216 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 HRH4Q9H3N8 390 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 WFDC1Q9HC57 220 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 CCL28Q9NRJ3 127 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 POLDIP2Q9Y2S7 368 aa7.96□□□□□ -1.14
CDK5RAP3-208ENST00000578525 PIGBOS1A0A0B4J2F0 54 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 CLEC18AA5D8T8 446 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 FAM74A7A6NL05 159 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 IQCF6A8MYZ5 107 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 NPIPB11E5RHQ5 1161 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 AQP7O14520 342 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 HS3ST1O14792 307 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 NKX2-8O15522 239 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 RHBDL1O75783 438 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 CELA3BP08861 270 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 WNT2P09544 360 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 FTH1P19P0C7X4 201 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 MMP9P14780 707 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 RAC2P15153 192 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 ZNF44P15621 663 aa7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 MUC1P15941 1255 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 NKX2-1P43699 371 aaPredicted RBP7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 NOVA1P51513 510 aaKnown RBP7.95□□□□□ -1.14
CDK5RAP3-208ENST00000578525 IDH3GP51553 393 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms