RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 VPS13CQ709C8 3753 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 RAI1Q7Z5J4 1906 aaPredicted RBP6.68□□□□□ -1.34
COPS3-215ENST00000578317 IGKV1D-17A0A075B6S4 117 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 TRAV24A0A0B4J272 114 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 SERPINE3A8MV23 424 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 LYNX1G3V0Z9 82 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 NDUFS8O00217 210 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 HAND1O96004 215 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 IGHV4-39P01824 125 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 CSF3P09919 207 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 LYNX1P0DP58 116 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 HIST1H1DP16402 221 aaKnown RBP6.68□□□□□ -1.34
COPS3-215ENST00000578317 GABRR1P24046 479 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 CD40LGP29965 261 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 KCNJ3P48549 501 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 DSCR9P59020 149 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 BTG1P62324 171 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 MRPS10P82664 201 aaKnown RBP6.68□□□□□ -1.34
COPS3-215ENST00000578317 RBM39Q14498 530 aaKnown RBP6.68□□□□□ -1.34
COPS3-215ENST00000578317 PNLIPRP3Q17RR3 467 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 CDNFQ49AH0 187 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 TMEM155Q4W5P6 130 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 PLAC9Q5JTB6 97 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 TMEM69Q5SWH9 247 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 FAM201AQ5SY85 155 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 SFRP4Q6FHJ7 346 aaPredicted RBP6.68□□□□□ -1.34
COPS3-215ENST00000578317 ZNF561Q8N587 486 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 CD177Q8N6Q3 437 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 ST8SIA4Q92187 359 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 SEH1LQ96EE3 360 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 TIMD4Q96H15 378 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 MED30Q96HR3 178 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 NEDD4LQ96PU5 975 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 ABHD1Q96SE0 405 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 FAM234AQ9H0X4 552 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 AUNIPQ9H7T9 357 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 PLEKHJ1Q9NW61 149 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 IL36RNQ9UBH0 155 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 DNAJB11Q9UBS4 358 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 KCNK7Q9Y2U2 307 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 V9GYH0 126 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 USF3Q68DE3 2245 aa6.68□□□□□ -1.34
COPS3-215ENST00000578317 POLQO75417 2590 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 ITPR2Q14571 2701 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 TRAV18A0A075B6X5 111 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 MCRIP1C9JLW8 97 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 K7N7A8 449 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 SULT1C2O00338 296 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 SLC33A1O00400 549 aaPredicted RBP6.67□□□□□ -1.34
COPS3-215ENST00000578317 MFNGO00587 321 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 SIGLEC5O15389 551 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 ZNF737O75373 536 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 LY6HO94772 140 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 OR2H2O95918 312 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 IGHV2-70P01814 119 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 CSN2P05814 226 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 DNASE1P24855 282 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 DUSP1P28562 367 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 MDH2P40926 338 aaKnown RBP6.67□□□□□ -1.34
COPS3-215ENST00000578317 PDLIM4P50479 330 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 PPP5CP53041 499 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 ATP5J2P56134 94 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 TAS2R20P59543 309 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 HOXA4Q00056 320 aaPredicted RBP6.67□□□□□ -1.34
COPS3-215ENST00000578317 CD83Q01151 205 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 ZMYND11Q15326 602 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 HACD4Q5VWC8 232 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 PRSS57Q6UWY2 283 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 DCDC5Q6ZRR9 648 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 BATF2Q8N1L9 274 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 GAPTQ8N292 157 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 MUC20Q8N307 709 aaPredicted RBP6.67□□□□□ -1.34
COPS3-215ENST00000578317 GDPD1Q8N9F7 314 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 DEFB108BQ8NET1 73 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 OR5D13Q8NGL4 314 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 ARHGAP5-AS1Q96IT6 56 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 SNX22Q96L94 193 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 TSC22D3Q99576 134 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 SHARPINQ9H0F6 387 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 RIMS4Q9H426 269 aaPredicted RBP6.67□□□□□ -1.34
COPS3-215ENST00000578317 NCOR1P1Q9H4R4 102 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 ZNF665Q9H7R5 613 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 SCPEP1Q9HB40 452 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 PLA2G2DQ9UNK4 145 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 MRPS7Q9Y2R9 242 aaKnown RBP6.67□□□□□ -1.34
COPS3-215ENST00000578317 MAB21L2Q9Y586 359 aa6.67□□□□□ -1.34
COPS3-215ENST00000578317 AKAP9Q99996 3911 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 MAP1AP78559 2803 aaPredicted RBP6.66□□□□□ -1.34
COPS3-215ENST00000578317 A0A0G2JMP0 313 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 A0A0X1KG70 313 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 PPIHO43447 177 aaKnown RBP6.66□□□□□ -1.34
COPS3-215ENST00000578317 GSTZ1O43708 216 aaPredicted RBP6.66□□□□□ -1.34
COPS3-215ENST00000578317 SSX4O60224 188 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 ZNF44P15621 663 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 GNB3P16520 340 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 ERP29P30040 261 aaKnown RBP6.66□□□□□ -1.34
COPS3-215ENST00000578317 CD80P33681 288 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 GPR6P46095 362 aaPredicted RBP6.66□□□□□ -1.34
COPS3-215ENST00000578317 GMFBP60983 142 aa6.66□□□□□ -1.34
COPS3-215ENST00000578317 COL10A1Q03692 680 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms