RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 ODAMA1E959 279 aa15.74■□□□□ 0.11
SS18-208ENST00000577751 MEIOCA2RUB1 952 aa15.74■□□□□ 0.11
SS18-208ENST00000577751 FBP1P09467 338 aa15.74■□□□□ 0.11
SS18-208ENST00000577751 KCNJ3P48549 501 aa15.74■□□□□ 0.11
SS18-208ENST00000577751 ATXN7L3Q14CW9 347 aaPredicted RBP15.74■□□□□ 0.11
SS18-208ENST00000577751 PAN3Q58A45 887 aaKnown RBP15.74■□□□□ 0.11
SS18-208ENST00000577751 UBE2UQ5VVX9 321 aa15.74■□□□□ 0.11
SS18-208ENST00000577751 GLT8D1Q68CQ7 371 aa15.74■□□□□ 0.11
SS18-208ENST00000577751 ZNF782Q6ZMW2 699 aaPredicted RBP15.74■□□□□ 0.11
SS18-208ENST00000577751 TAS2R3Q9NYW6 316 aa15.74■□□□□ 0.11
SS18-208ENST00000577751 GHRLQ9UBU3 117 aa15.74■□□□□ 0.11
SS18-208ENST00000577751 FAM96BQ9Y3D0 163 aa15.74■□□□□ 0.11
SS18-208ENST00000577751 POMT1Q9Y6A1 747 aa15.74■□□□□ 0.11
SS18-208ENST00000577751 TRGV10A0A0A0MS01 117 aa15.73■□□□□ 0.11
SS18-208ENST00000577751 HSPB6O14558 160 aa15.73■□□□□ 0.11
SS18-208ENST00000577751 OR7C1O76099 320 aaPredicted RBP15.73■□□□□ 0.11
SS18-208ENST00000577751 IER3P46695 156 aa15.73■□□□□ 0.11
SS18-208ENST00000577751 TRAPPC6BQ86SZ2 158 aa15.73■□□□□ 0.11
SS18-208ENST00000577751 SUMF2Q8NBJ7 301 aa15.73■□□□□ 0.11
SS18-208ENST00000577751 OR11H6Q8NGC7 330 aa15.73■□□□□ 0.11
SS18-208ENST00000577751 SSMEM1Q8WWF3 244 aa15.73■□□□□ 0.11
SS18-208ENST00000577751 DPCDQ9BVM2 203 aaPredicted RBP15.73■□□□□ 0.11
SS18-208ENST00000577751 BARHL1Q9BZE3 327 aa15.73■□□□□ 0.11
SS18-208ENST00000577751 NDUFB11Q9NX14 153 aa15.73■□□□□ 0.11
SS18-208ENST00000577751 TMEM89A2RUT3 159 aa15.72■□□□□ 0.11
SS18-208ENST00000577751 ARL6IP5O75915 188 aa15.72■□□□□ 0.11
SS18-208ENST00000577751 CGB3P0DN86 165 aa15.72■□□□□ 0.11
SS18-208ENST00000577751 CGB7P0DN87 165 aa15.72■□□□□ 0.11
SS18-208ENST00000577751 COX7A1P24310 79 aa15.72■□□□□ 0.11
SS18-208ENST00000577751 TAF9Q16594 264 aa15.72■□□□□ 0.11
SS18-208ENST00000577751 RSBN1Q5VWQ0 802 aaPredicted RBP15.72■□□□□ 0.11
SS18-208ENST00000577751 C16orf87Q6PH81 154 aa15.72■□□□□ 0.11
SS18-208ENST00000577751 CD200R1LQ6Q8B3 271 aa15.72■□□□□ 0.11
SS18-208ENST00000577751 TMEM104Q8NE00 496 aa15.72■□□□□ 0.11
SS18-208ENST00000577751 OR13D1Q8NGV5 346 aa15.72■□□□□ 0.11
SS18-208ENST00000577751 PLPPR1Q8TBJ4 325 aa15.72■□□□□ 0.11
SS18-208ENST00000577751 GFI1Q99684 422 aa15.72■□□□□ 0.11
SS18-208ENST00000577751 SLITRK2Q9H156 845 aa15.72■□□□□ 0.11
SS18-208ENST00000577751 MEGF9Q9H1U4 602 aa15.72■□□□□ 0.11
SS18-208ENST00000577751 GAL3ST2Q9H3Q3 398 aa15.72■□□□□ 0.11
SS18-208ENST00000577751 OR6C3Q9NZP0 311 aa15.72■□□□□ 0.11
SS18-208ENST00000577751 ZNRD1Q9P1U0 126 aa15.72■□□□□ 0.11
SS18-208ENST00000577751 SESN1Q9Y6P5 492 aa15.72■□□□□ 0.11
SS18-208ENST00000577751 DNHD1Q96M86 4753 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 FAM90A10PA6NDY2 464 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 FAM90A18PA6NE21 464 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 FAM90A16PA6NEW6 464 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 FAM90A20PA6NIJ5 464 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 FAM90A8PA6NJQ4 464 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 FAM90A7PA6NKC0 464 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 FAM90A22PA8MWA6 464 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 FAM90A12PA8MX19 464 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 FAM90A5PA8MXJ8 464 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 FAM90A23PA8MXZ1 464 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 ODF3BA8MYP8 253 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 MMP23AO75900 390 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 CLPXO76031 633 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 FAM90A15PP0C7V4 464 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 FAM90A13PP0C7W8 464 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 FAM90A14PP0C7W9 464 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 FAM90A24PP0C7X0 464 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 UBBP0CG47 229 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 HKR1P10072 659 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 MGMTP16455 207 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 COMPP49747 757 aaPredicted RBP15.71■□□□□ 0.11
SS18-208ENST00000577751 ZNF626Q68DY1 528 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 ZNF773Q6PK81 442 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 HEPN1Q6WQI6 88 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 BEND2Q8NDZ0 799 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 C17orf50Q8WW18 174 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 FCGR1BQ92637 280 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 CHIAQ9BZP6 476 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 BANF2Q9H503 90 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 ING3Q9NXR8 418 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 RCC2Q9P258 522 aaKnown RBP15.71■□□□□ 0.11
SS18-208ENST00000577751 KIF25Q9UIL4 384 aa15.71■□□□□ 0.11
SS18-208ENST00000577751 SLC22A1O15245 554 aa15.7■□□□□ 0.1
SS18-208ENST00000577751 PAHP00439 452 aa15.7■□□□□ 0.1
SS18-208ENST00000577751 IGHV4-59P01825 116 aa15.7■□□□□ 0.1
SS18-208ENST00000577751 GALP22466 123 aa15.7■□□□□ 0.1
SS18-208ENST00000577751 ACTG1P63261 375 aa15.7■□□□□ 0.1
SS18-208ENST00000577751 C17orf58Q2M2W7 97 aa15.7■□□□□ 0.1
SS18-208ENST00000577751 KCTD21Q4G0X4 260 aa15.7■□□□□ 0.1
SS18-208ENST00000577751 SLC35E4Q6ICL7 350 aa15.7■□□□□ 0.1
SS18-208ENST00000577751 ZNF565Q8N9K5 539 aa15.7■□□□□ 0.1
SS18-208ENST00000577751 Q96M66 194 aa15.7■□□□□ 0.1
SS18-208ENST00000577751 SELENOIQ9C0D9 397 aa15.7■□□□□ 0.1
SS18-208ENST00000577751 TMEM133Q9H2Q1 129 aa15.7■□□□□ 0.1
SS18-208ENST00000577751 DPAGT1Q9H3H5 408 aa15.7■□□□□ 0.1
SS18-208ENST00000577751 SPACA1Q9HBV2 294 aa15.7■□□□□ 0.1
SS18-208ENST00000577751 MEIKINA0A087WXM9 373 aa15.69■□□□□ 0.1
SS18-208ENST00000577751 TRDV1A0A1B0GX56 115 aa15.69■□□□□ 0.1
SS18-208ENST00000577751 ZNF729A6NN14 1252 aaPredicted RBP15.69■□□□□ 0.1
SS18-208ENST00000577751 CCRL2O00421 344 aa15.69■□□□□ 0.1
SS18-208ENST00000577751 RRP9O43818 475 aaKnown RBP15.69■□□□□ 0.1
SS18-208ENST00000577751 CRTAPO75718 401 aaPredicted RBP15.69■□□□□ 0.1
SS18-208ENST00000577751 VSIG8P0DPA2 414 aa15.69■□□□□ 0.1
SS18-208ENST00000577751 CDK2P24941 298 aa15.69■□□□□ 0.1
SS18-208ENST00000577751 CALRP27797 417 aaKnown RBP15.69■□□□□ 0.1
SS18-208ENST00000577751 HTR2CP28335 458 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms